G21238


Basic Information

Item Value
gene id G21238
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 462068 ~ 462324 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU23869
CATGAGGCGTCCTATGAATAGAACGGCAAATTACGCAGTACTCCGTTCCGTATCAAAGGGAACCGAGGTTACGTTAGTAACCGAGTACGTTCCCTTTCGATACTACACTTCGTACTGCATCGTCTGCCGCTTAGGCAAGACGCAACAGGGATTATATCACGCCGTGCTATGAAGGGGGGACGACAGAGCATCCGAGCAGAGCACTGAGGAGGGCTTGCACGGATGCACATAGCATAATGTATCCCAGAAGATCGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23869 True 257 lncRNA 0.52 1 462068 462324

Neighbor

gene id symbol gene type direction distance location
CI01000002_00407685_00411542 NA coding upstream 50146 407477 ~ 411922 (+)
CI01000002_00401987_00402742 NA coding upstream 59291 400991 ~ 402777 (+)
CI01000002_00066136_00130168 BMP7, BMP7.1, BMP7B, BMP7.1.L coding upstream 331900 66136 ~ 130168 (+)
CI01000002_00021260_00021739 NA coding upstream 440217 21260 ~ 21851 (+)
CI01000002_00470438_00473433 NA coding downstream 8114 470438 ~ 474568 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding downstream 236733 699057 ~ 708305 (+)
CI01000002_00718489_00718872 PHLDA3 coding downstream 255898 718222 ~ 719501 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding downstream 275803 738127 ~ 744755 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding downstream 309840 772164 ~ 786566 (+)
G21117 NA non-coding upstream 21692 439753 ~ 440376 (+)
G21101 NA non-coding upstream 54719 404508 ~ 407349 (+)
G21045 NA non-coding upstream 81889 319605 ~ 380179 (+)
G21017 NA non-coding upstream 90567 298783 ~ 371501 (+)
G21240 NA non-coding downstream 1792 464116 ~ 464324 (+)
G21243 NA non-coding downstream 5908 468232 ~ 468435 (+)
G21251 NA non-coding downstream 14323 476647 ~ 476857 (+)
G21265 NA non-coding downstream 43972 506296 ~ 510897 (+)
G21258 NA non-coding downstream 49118 511442 ~ 516383 (+)
G21239 NA other downstream 1231 463555 ~ 463916 (+)
G21254 NA other downstream 16823 479147 ~ 480455 (+)
G21272 NA other downstream 60683 523007 ~ 525797 (+)
G21930 NA other downstream 925290 1387614 ~ 1409057 (+)

Expression


Co-expression Network