G21372


Basic Information

Item Value
gene id G21372
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 677554 ~ 677767 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24008
ATCGAAATCCTCTGATATTTCTCTTTAAAAATTCACGTTTTAGACTTCTAATGACTGGTGTTTTGTTTTACTCTGTCCTCTGCGAGGTAAGAGGTTATTCTTCCGCCGCAAATCGATGCGTATGGTCGTCTGTCGGAAGCTAGTTATTATAGTTAATAAAGTTTTAAATTTGGATATTTTTCTTACAGAATCCTACCCATATTTTTCTTACCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24008 True 214 lncRNA 0.35 1 677554 677767

Neighbor

gene id symbol gene type direction distance location
CI01000002_00470438_00473433 NA coding upstream 202986 470438 ~ 474568 (+)
CI01000002_00407685_00411542 NA coding upstream 265632 407477 ~ 411922 (+)
CI01000002_00401987_00402742 NA coding upstream 274777 400991 ~ 402777 (+)
CI01000002_00066136_00130168 BMP7, BMP7.1, BMP7B, BMP7.1.L coding upstream 547386 66136 ~ 130168 (+)
CI01000002_00021260_00021739 NA coding upstream 655703 21260 ~ 21851 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding downstream 21290 699057 ~ 708305 (+)
CI01000002_00718489_00718872 PHLDA3 coding downstream 40455 718222 ~ 719501 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding downstream 60360 738127 ~ 744755 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding downstream 94397 772164 ~ 786566 (+)
CI01000002_01017365_01040978 NA coding downstream 339422 1017189 ~ 1041687 (+)
G21269 NA non-coding upstream 53235 595037 ~ 624319 (+)
G21258 NA non-coding upstream 161171 511442 ~ 516383 (+)
G21265 NA non-coding upstream 166657 506296 ~ 510897 (+)
G21251 NA non-coding upstream 200697 476647 ~ 476857 (+)
G21243 NA non-coding upstream 209119 468232 ~ 468435 (+)
G21411 NA non-coding downstream 109518 787285 ~ 788362 (+)
G21415 NA non-coding downstream 117510 795277 ~ 799950 (+)
G21552 NA non-coding downstream 168679 846446 ~ 846658 (+)
G21554 NA non-coding downstream 172411 850178 ~ 863796 (+)
G21561 NA non-coding downstream 186930 864697 ~ 865115 (+)
G21272 NA other upstream 151757 523007 ~ 525797 (+)
G21254 NA other upstream 197099 479147 ~ 480455 (+)
G21239 NA other upstream 213638 463555 ~ 463916 (+)
G21930 NA other downstream 709847 1387614 ~ 1409057 (+)

Expression


Co-expression Network