G21561


Basic Information

Item Value
gene id G21561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 864697 ~ 865115 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24219
TTACCTACTAACGCGGCCTTTAAATAACAAAAAAGAAAAAAAAAATTGCGCCATTGACTTTAGACCAGGTTTTAGTTGGTCAATGGCACATTCGTTTTCAGTTGCCTCAAAATAGCAACACGCCAACAATGCGCCTGAACACACCTTGTTTTCAGACCAGCACGCCCATGGGCGAACAGATGGGTGCAAGTGCATTTGCTATTTAAACAATGTGGCGCTGGACGTGAAAATTATAACTGCGTTGGGCTGAAACTAGCAAAAAACACTTGTGTCGCGCCTGTCGCCGCATTGCGCCAGGTGTGTGATAGGGCCCCTATGGGTCATTCCGTGTCAAATCAACCACATTTTGGAAACTTCCCTGGCTCAATTTTTTTTTCTGTTGAAAGACCAATAGACCAATAAATAGTGATGAAAGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24219 True 419 lncRNA 0.49 1 864697 865115

Neighbor

gene id symbol gene type direction distance location
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 78131 772164 ~ 786566 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding upstream 119942 738127 ~ 744755 (+)
CI01000002_00718489_00718872 PHLDA3 coding upstream 145196 718222 ~ 719501 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding upstream 156392 699057 ~ 708305 (+)
CI01000002_00470438_00473433 NA coding upstream 390129 470438 ~ 474568 (+)
CI01000002_01017365_01040978 NA coding downstream 152074 1017189 ~ 1041687 (+)
CI01000002_01047128_01076568 NA coding downstream 181853 1046968 ~ 1076571 (+)
CI01000002_01103311_01128430 LGR6 coding downstream 238196 1103311 ~ 1128805 (+)
CI01000002_01154239_01172018 NA coding downstream 288396 1153511 ~ 1172865 (+)
CI01000002_01257892_01258637 NA coding downstream 392602 1257717 ~ 1258637 (+)
G21554 NA non-coding upstream 901 850178 ~ 863796 (+)
G21552 NA non-coding upstream 18039 846446 ~ 846658 (+)
G21415 NA non-coding upstream 64747 795277 ~ 799950 (+)
G21411 NA non-coding upstream 76335 787285 ~ 788362 (+)
G21372 NA non-coding upstream 186930 677554 ~ 677767 (+)
G21578 NA non-coding downstream 49237 914352 ~ 914569 (+)
G21589 NA non-coding downstream 72081 937196 ~ 937501 (+)
G21591 NA non-coding downstream 73536 938651 ~ 940616 (+)
G21592 NA non-coding downstream 77171 942286 ~ 942573 (+)
G21593 NA non-coding downstream 78319 943434 ~ 943686 (+)
G21272 NA other upstream 338900 523007 ~ 525797 (+)
G21254 NA other upstream 384242 479147 ~ 480455 (+)
G21239 NA other upstream 400781 463555 ~ 463916 (+)
G21930 NA other downstream 522499 1387614 ~ 1409057 (+)

Expression


Co-expression Network