G21591


Basic Information

Item Value
gene id G21591
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 938651 ~ 940616 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24253
TTGTGTCACATGGCTGAATTATAAGATTGTGTTATCTAGCTATTAAACTATTAGCTAGCAACAACAACAGCACATATTAGCATGCTAAATGCTAAGTAATGAAAAGCGGTAATGTATCAGACCACAGCCTAAGCAAATTAAACTCTATTAAACTCTATCAAGTCTGCCCTTTTTCTCATTTTGCTCAAAAACACATAAAACAACACTTAATTTCAACATTTTTACTCTCCTCATTAAGTCCCAAGCAAAGCATGCTGGGAATTACAGTTTCAGCAAAAATCATTTTCGAGTACTTGATTGGCTCACCTTAAATAATTTAATCTAGTAGATTGCACATTTTGGAAAATTACAATAATCGAAAGCAAAGAAATCAAGTTTTTGAAGAGAAACACAATTTTGTCATGTAGATCGCAAATTAGACAATATGTGTTTTCCCATTTATCAGTGAAATTTAGTTTGTATTAATTTGTATTTCAGTTTTAGTTATTTTAGTACATCATGTTAAATTAAATGAAAATAAGAAATGTTGCCTTGGCAAGATGAAATAAAATATGTTTTTTATGCTTTATTTTATTTCAGCTAATATGTATTTATTTCAAGCAACAAAAATGTTTTTTTATGGTTTTAGTATCAGTTAACAATCATGACAACTCTTTGAATAGCTTTAGCATGTTTTTGAATATGGCAATGTTAATGTATTTGGTCTTGGTGGACTAGATCTGCTACGCTTTTAAAACTAACTTTTTGCCACACCTGCCAATGGCCGGTGATCATTTACTGACCATAAATATTTTTTACCAGCCATGAAACATAGATTAAGTGATTTATCTTTGTCTTTTGTTGTTTACTTAACATTAAAAATACAGACAGCAGCAGGAATATTAGGCTGCTGTCACTTTAAGTGCTAATGCACAGATCCAACATATTGATATATGTGTGTTTTCTTGTTTTTCTTGAACTGTTTACGTTCACTTAAGACATAACTATGTTAAACATGACTATGTTTACTTTTTTACGAGGACACTGGCCAAGACCCACATTAAAGTATGTTTGCACTTGAATATGAATGTGTAGACATAGTTCGAAACATACAAAAACACAAACACACTGATGTATAACTCACCTGTCCTGACCTTTTGAAGTCGTCATTAGGGAGACTGAGAGATAAATCAACATTATTAGCAAAGCACACACACTATTGACATTATTTATAATGGAGCAGAAATCACTACTCACCTGTCTTCTGTCCAAACCTCCTTCAGGATCTCTTTCTGCAGAGGCATCAAGTGAAAATAACTGAAGATCAGCAAAACCTCAGAATTCTTCTCAAATAAAATATCCAAAGCTCAATCAATCAGTAATAATTATCAGTATTTCATTACAACTTATAACTATATTTTTAATGCATTTTTTCTCCATCCAATCTTGTCCAATCAAGTCCTGACACGCATTGCAGAAACGTTGCCTATGCGTCTTTGCACTTGAAAACATAGATGTTGGGCTTTACTGGTCATCTTAAAAGGCCAATAAGATGAGAGTGCTGTTTCCCAGCATGCAATTATATTTAAATGTATGCCATCTGTCATTGCGAGACAAACCAGCATCTACCCATTACAAAACCAGTCAGTGGAGGTCTTATCCACCTGCAAAGATTTAAAAGGATTGCCATCAGAATTAGAGGGCTGCCACATGTCTCTGTGGGGGATTTGCTACATAAAGCTCACACATACTAATCATTAAAATAATGCTGTATTATTAATAATAATAAAAAAAAAAAGATGACTATAGCAAAATCTGTTAACCCGTACTCCATAAAAGCCATTGATTTATGCCATCTTAGAGCATGACAGTGATGTATTTTTATTATACAATAATGGTAGCACTTTATAATAAGTTTCCATTTGTTAATATTAGTTAACTACAATAGTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24253 True 1966 lncRNA 0.25 1 938651 940616

Neighbor

gene id symbol gene type direction distance location
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 152085 772164 ~ 786566 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding upstream 193896 738127 ~ 744755 (+)
CI01000002_00718489_00718872 PHLDA3 coding upstream 219150 718222 ~ 719501 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding upstream 230346 699057 ~ 708305 (+)
CI01000002_00470438_00473433 NA coding upstream 464083 470438 ~ 474568 (+)
CI01000002_01017365_01040978 NA coding downstream 76573 1017189 ~ 1041687 (+)
CI01000002_01047128_01076568 NA coding downstream 106352 1046968 ~ 1076571 (+)
CI01000002_01103311_01128430 LGR6 coding downstream 162695 1103311 ~ 1128805 (+)
CI01000002_01154239_01172018 NA coding downstream 212895 1153511 ~ 1172865 (+)
CI01000002_01257892_01258637 NA coding downstream 317101 1257717 ~ 1258637 (+)
G21589 NA non-coding upstream 1150 937196 ~ 937501 (+)
G21578 NA non-coding upstream 24082 914352 ~ 914569 (+)
G21561 NA non-coding upstream 73536 864697 ~ 865115 (+)
G21554 NA non-coding upstream 74855 850178 ~ 863796 (+)
G21552 NA non-coding upstream 91993 846446 ~ 846658 (+)
G21592 NA non-coding downstream 1670 942286 ~ 942573 (+)
G21593 NA non-coding downstream 2818 943434 ~ 943686 (+)
G21600 NA non-coding downstream 14288 954904 ~ 955193 (+)
G21603 NA non-coding downstream 18187 958803 ~ 959087 (+)
G21605 NA non-coding downstream 19999 960615 ~ 974163 (+)
G21272 NA other upstream 412854 523007 ~ 525797 (+)
G21254 NA other upstream 458196 479147 ~ 480455 (+)
G21239 NA other upstream 474735 463555 ~ 463916 (+)
G21930 NA other downstream 446998 1387614 ~ 1409057 (+)

Expression


Co-expression Network