G21603


Basic Information

Item Value
gene id G21603
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 958803 ~ 959087 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24266
CAATTTCAACATTTATTAGGCTTTAAAAAATAACTTTTAATTTAAGTGAACTTAAAACAATCTTCACATAAACCCATTATAATAAATGTCATTTATATACAGAAATTGAATAAAGTTATCAAACACTTTACAGTCTTCACTGCATAAATTATAAAATAAATATAGATTAATCCTCATTAAAACTACAGTTTTCTCTGTTACCTTTGTTCTTTGATGAACATTAATGACAGACATCACAGCAACTGGTTTATTAGGCTGCTGTCACTTTAAGAGCTGCCACTGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24266 True 285 lncRNA 0.28 1 958803 959087

Neighbor

gene id symbol gene type direction distance location
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 172237 772164 ~ 786566 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding upstream 214048 738127 ~ 744755 (+)
CI01000002_00718489_00718872 PHLDA3 coding upstream 239302 718222 ~ 719501 (+)
CI01000002_00699406_00707935 CSRP1, CSRP1A, CSRP1B coding upstream 250498 699057 ~ 708305 (+)
CI01000002_00470438_00473433 NA coding upstream 484235 470438 ~ 474568 (+)
CI01000002_01017365_01040978 NA coding downstream 58102 1017189 ~ 1041687 (+)
CI01000002_01047128_01076568 NA coding downstream 87881 1046968 ~ 1076571 (+)
CI01000002_01103311_01128430 LGR6 coding downstream 144224 1103311 ~ 1128805 (+)
CI01000002_01154239_01172018 NA coding downstream 194424 1153511 ~ 1172865 (+)
CI01000002_01257892_01258637 NA coding downstream 298630 1257717 ~ 1258637 (+)
G21600 NA non-coding upstream 3610 954904 ~ 955193 (+)
G21593 NA non-coding upstream 15117 943434 ~ 943686 (+)
G21592 NA non-coding upstream 16230 942286 ~ 942573 (+)
G21591 NA non-coding upstream 18187 938651 ~ 940616 (+)
G21589 NA non-coding upstream 21302 937196 ~ 937501 (+)
G21605 NA non-coding downstream 1528 960615 ~ 974163 (+)
G21607 NA non-coding downstream 30352 989439 ~ 991677 (+)
G21610 NA non-coding downstream 36952 996039 ~ 996242 (+)
G21612 NA non-coding downstream 40925 1000012 ~ 1000245 (+)
G21674 NA non-coding downstream 170381 1129468 ~ 1130441 (+)
G21272 NA other upstream 433006 523007 ~ 525797 (+)
G21254 NA other upstream 478348 479147 ~ 480455 (+)
G21239 NA other upstream 494887 463555 ~ 463916 (+)
G21930 NA other downstream 428527 1387614 ~ 1409057 (+)

Expression


Co-expression Network