G21674


Basic Information

Item Value
gene id G21674
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1129468 ~ 1130441 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24363
AGTTTATATAAAAAAAAGTCAGAATTGTGAGATAAAAAGTTGCAATTATTCCTTTTTTATTCAGTGGTGGAAACAAGCTTCCATAGAATCTATCTAGAACAGTAGTCGCACAGCTAAAATGATTCAGACAGCTTGTTTTGAACCTGGAACATTCCTTTAATTTGAAAAAAATCACAGGGATGTTTGCTGATGTAAAAAAAGGAGTTATGTATCTAAATATTTCAATGTGAAAAAGGTCTCTGCATAAAGCTCAGTTCTTATGTCATGTATCTAAAGCATTATGCATTCATTTCCAAGTGTGTATATATATCAAAGTCTTGTTAATTATATGCAAGTTGTTACTTGCTTATGTGCCCCTAGTGAAAAAAAAAAAAAAAAAATGTACGGGAAGGTAAATACCTATGTATATTGTCAAATAATATTTAGTGTCTTGAGAAACAACAACAAAAGCATCATACCAAGAGATGCTTAAACATAAGGCCAGAAACATACTCTCTGCAAGTACACAAAAGGCTTGGCCAACGGTTCCTGTCCAACTCTACATATTTAACATGCATTGTGGTGGCAAGAAACCTCGAGAGAACAGAGTTACCTTCAAATGTCTGTGCCATAAATTCAGGTGTCTAGCTATAAACATGCTGACAACTCATTTTAACTAATTGACTTTCTTCAAACCATTGCTTCAACATGACAGAAGTTGATCTAGGAGACATTTTGCTTATTCATACCACAATCCACCTGCCAGTAACTGCAATGCAGTATGTATTAAAATGAGTTAAAATGTAAATCGTAATTCAACACAGCATGAACATCAAGCTTGTGAAGTTAGAAGCACTGCATTCACGTACTTGCATAGACTATGTCTGAGCCTCACAACATATATTTTCAGAGTTGCATTTCCTTTTTTACATCAAGTTAACAGGATTAAGGAAGAGCAAAAAGTTAAATGAACATGTCAGTGCTAAGATATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24363 True 974 lncRNA 0.34 1 1129468 1130441

Neighbor

gene id symbol gene type direction distance location
CI01000002_01103311_01128430 LGR6 coding upstream 663 1103311 ~ 1128805 (+)
CI01000002_01047128_01076568 NA coding upstream 52897 1046968 ~ 1076571 (+)
CI01000002_01017365_01040978 NA coding upstream 87781 1017189 ~ 1041687 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 342902 772164 ~ 786566 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding upstream 384713 738127 ~ 744755 (+)
CI01000002_01154239_01172018 NA coding downstream 23070 1153511 ~ 1172865 (+)
CI01000002_01257892_01258637 NA coding downstream 127276 1257717 ~ 1258637 (+)
CI01000002_01474926_01477596 NGFA coding downstream 344485 1474926 ~ 1477913 (+)
CI01000002_01546448_01547246 NA coding downstream 416007 1546448 ~ 1547474 (+)
CI01000002_01650177_01674596 UHRF1BP1 coding downstream 519736 1650177 ~ 1674657 (+)
G21612 NA non-coding upstream 129223 1000012 ~ 1000245 (+)
G21610 NA non-coding upstream 133226 996039 ~ 996242 (+)
G21607 NA non-coding upstream 137791 989439 ~ 991677 (+)
G21605 NA non-coding upstream 155305 960615 ~ 974163 (+)
G21603 NA non-coding upstream 170381 958803 ~ 959087 (+)
G21697 NA non-coding downstream 2472 1132913 ~ 1144177 (+)
G21702 NA non-coding downstream 32019 1162460 ~ 1162881 (+)
G21713 NA non-coding downstream 69235 1199676 ~ 1199884 (+)
G21714 NA non-coding downstream 70376 1200817 ~ 1201074 (+)
G21716 NA non-coding downstream 74102 1204543 ~ 1204919 (+)
G21272 NA other upstream 603671 523007 ~ 525797 (+)
G21254 NA other upstream 649013 479147 ~ 480455 (+)
G21239 NA other upstream 665552 463555 ~ 463916 (+)
G21930 NA other downstream 257173 1387614 ~ 1409057 (+)

Expression


Co-expression Network