G21702


Basic Information

Item Value
gene id G21702
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1162460 ~ 1162881 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24398
GGTAAACACAATCCGCTGTGCCATCTGCAGATGTCAACTAAAGCTCTATCATGCAAAATAGCGTGTTATCAGCGTTCAGATCAAAAGCCAGCATCTCTGATAGTATGGAGGTGCATATGGTATGGGCAGCTTGCATGTTTTGGAAGGCAATATGAATGCTAAAAGGTATATAAAGGTTTTAGAGCAACATATGCTCCCCTCCAGATGACGTCTATTTCGGAGAAGGCCTTGTGTATTTCAGCAGGACAATGCAAAACCACATACTGCAGCTATTACAACAGCATGGCTTCATCGTAGAAGAGTCCGGGTGCTGAATTGGCCTGCCTGCAGTCCAGATCTTTCACCTATAGAGAACATTTGGCACATCATTAAACAAAAAATACGTCAAAGATGACCACAAACTCTTCAGCAGCTGGAAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24398 True 422 lncRNA 0.43 1 1162460 1162881

Neighbor

gene id symbol gene type direction distance location
CI01000002_01103311_01128430 LGR6 coding upstream 33655 1103311 ~ 1128805 (+)
CI01000002_01047128_01076568 NA coding upstream 85889 1046968 ~ 1076571 (+)
CI01000002_01017365_01040978 NA coding upstream 120773 1017189 ~ 1041687 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 375894 772164 ~ 786566 (+)
CI01000002_00738127_00744469 TNNI1A, TNNI1B, TNNI1 coding upstream 417705 738127 ~ 744755 (+)
CI01000002_01257892_01258637 NA coding downstream 94836 1257717 ~ 1258637 (+)
CI01000002_01474926_01477596 NGFA coding downstream 312045 1474926 ~ 1477913 (+)
CI01000002_01546448_01547246 NA coding downstream 383567 1546448 ~ 1547474 (+)
CI01000002_01650177_01674596 UHRF1BP1 coding downstream 487296 1650177 ~ 1674657 (+)
CI01000002_01755342_01805760 NA coding downstream 591587 1754468 ~ 1805772 (+)
G21697 NA non-coding upstream 18283 1132913 ~ 1144177 (+)
G21674 NA non-coding upstream 32019 1129468 ~ 1130441 (+)
G21612 NA non-coding upstream 162215 1000012 ~ 1000245 (+)
G21610 NA non-coding upstream 166218 996039 ~ 996242 (+)
G21607 NA non-coding upstream 170783 989439 ~ 991677 (+)
G21713 NA non-coding downstream 36795 1199676 ~ 1199884 (+)
G21714 NA non-coding downstream 37936 1200817 ~ 1201074 (+)
G21716 NA non-coding downstream 41662 1204543 ~ 1204919 (+)
G21727 NA non-coding downstream 71069 1233950 ~ 1234229 (+)
G21728 NA non-coding downstream 71694 1234575 ~ 1234788 (+)
G21272 NA other upstream 636663 523007 ~ 525797 (+)
G21254 NA other upstream 682005 479147 ~ 480455 (+)
G21239 NA other upstream 698544 463555 ~ 463916 (+)
G21930 NA other downstream 224733 1387614 ~ 1409057 (+)

Expression


Co-expression Network