G21728


Basic Information

Item Value
gene id G21728
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1234575 ~ 1234788 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24438
ATTGTTGCACCCTTACTATGTGCCTCTTTTCTTTATGAGGTCTTAATAGCGGGTAGCATTAAGAACGAAATATCACCTGTAGTGAATGGCATGGCCTCCTTTCGATCTGAGAGTTTTTTTTTAGGGCTGCCGCTCATCCGAGCTTCAGGTAGTTGATATGTCAGGTGTTCGGCCCTCAGGGGCCGCCCTGATAATCCTCCTGGGTTGCGTGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24438 True 214 lncRNA 0.49 1 1234575 1234788

Neighbor

gene id symbol gene type direction distance location
CI01000002_01154239_01172018 NA coding upstream 61710 1153511 ~ 1172865 (+)
CI01000002_01103311_01128430 LGR6 coding upstream 105770 1103311 ~ 1128805 (+)
CI01000002_01047128_01076568 NA coding upstream 158004 1046968 ~ 1076571 (+)
CI01000002_01017365_01040978 NA coding upstream 192888 1017189 ~ 1041687 (+)
CI01000002_00772164_00786566 TNNT2, TNNT2A coding upstream 448009 772164 ~ 786566 (+)
CI01000002_01257892_01258637 NA coding downstream 22929 1257717 ~ 1258637 (+)
CI01000002_01474926_01477596 NGFA coding downstream 240138 1474926 ~ 1477913 (+)
CI01000002_01546448_01547246 NA coding downstream 311660 1546448 ~ 1547474 (+)
CI01000002_01650177_01674596 UHRF1BP1 coding downstream 415389 1650177 ~ 1674657 (+)
CI01000002_01755342_01805760 NA coding downstream 519680 1754468 ~ 1805772 (+)
G21727 NA non-coding upstream 346 1233950 ~ 1234229 (+)
G21716 NA non-coding upstream 29656 1204543 ~ 1204919 (+)
G21714 NA non-coding upstream 33501 1200817 ~ 1201074 (+)
G21713 NA non-coding upstream 34691 1199676 ~ 1199884 (+)
G21702 NA non-coding upstream 71694 1162460 ~ 1162881 (+)
G21729 NA non-coding downstream 450 1235238 ~ 1235492 (+)
G21738 NA non-coding downstream 13710 1248498 ~ 1248732 (+)
G21739 NA non-coding downstream 14444 1249232 ~ 1249500 (+)
G21740 NA non-coding downstream 14784 1249572 ~ 1249966 (+)
G21741 NA non-coding downstream 15369 1250157 ~ 1250602 (+)
G21272 NA other upstream 708778 523007 ~ 525797 (+)
G21254 NA other upstream 754120 479147 ~ 480455 (+)
G21239 NA other upstream 770659 463555 ~ 463916 (+)
G21930 NA other downstream 152826 1387614 ~ 1409057 (+)

Expression


Co-expression Network