G21942


Basic Information

Item Value
gene id G21942
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1427935 ~ 1428276 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU24720
CCCACTTAAAAAGATGAGAGAGGCCTGTAATTTTCATCATAGGTACATTTCAACTATGAGAGACAAAATGAGAAAAAAAAAATCCTGAAAATCACATTGTCTGATTTTTAAAGAATTCATTTGCAAATTATAATGGAAAATAAGTATTTGGTCAATAACAAAAGTTCATCTCAATACTTTGTTATATACCCTTTGTTGGCAATGACAGAAGTCAAACGTTTTCTGTAAGTCTCCACAAGGTTTTTACACACTGTTGCTGGTAGTTTGGCCCATTCCTCCATGCAGATCTCCTCTAGAGCAGTGATGTTTTGGGGCTGTCGCTGGGCAACACGGATTTTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24720 True 342 lncRNA 0.36 1 1427935 1428276

Neighbor

gene id symbol gene type direction distance location
CI01000002_01257892_01258637 NA coding upstream 169298 1257717 ~ 1258637 (+)
CI01000002_01154239_01172018 NA coding upstream 255070 1153511 ~ 1172865 (+)
CI01000002_01103311_01128430 LGR6 coding upstream 299130 1103311 ~ 1128805 (+)
CI01000002_01047128_01076568 NA coding upstream 351364 1046968 ~ 1076571 (+)
CI01000002_01017365_01040978 NA coding upstream 386248 1017189 ~ 1041687 (+)
CI01000002_01474926_01477596 NGFA coding downstream 46650 1474926 ~ 1477913 (+)
CI01000002_01546448_01547246 NA coding downstream 118172 1546448 ~ 1547474 (+)
CI01000002_01650177_01674596 UHRF1BP1 coding downstream 221901 1650177 ~ 1674657 (+)
CI01000002_01755342_01805760 NA coding downstream 326192 1754468 ~ 1805772 (+)
CI01000002_01821988_01829384 ANKS1A coding downstream 393480 1821756 ~ 1829430 (+)
G21927 NA non-coding upstream 41409 1386289 ~ 1386526 (+)
G21922 NA non-coding upstream 46597 1381129 ~ 1381338 (+)
G21921 NA non-coding upstream 46985 1380680 ~ 1380950 (+)
G21919 NA non-coding upstream 48178 1379348 ~ 1379757 (+)
G21911 NA non-coding upstream 55383 1371755 ~ 1372552 (+)
G21943 NA non-coding downstream 688 1428964 ~ 1429392 (+)
G21945 NA non-coding downstream 4849 1433125 ~ 1433334 (+)
G21946 NA non-coding downstream 5093 1433369 ~ 1433612 (+)
G22022 NA non-coding downstream 56786 1485062 ~ 1485316 (+)
G22048 NA non-coding downstream 94146 1522422 ~ 1522715 (+)
G21930 NA other upstream 18878 1387614 ~ 1409057 (+)
G21272 NA other upstream 902138 523007 ~ 525797 (+)
G21254 NA other upstream 947480 479147 ~ 480455 (+)
G21239 NA other upstream 964019 463555 ~ 463916 (+)

Expression


Co-expression Network