G172733


Basic Information

Item Value
gene id G172733
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 59199 ~ 59438 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU255962
CTGAGGCTCAGCAGCTCCAGTCTCTCCACATTGTCCTTAGAGATGGACAAATTGACGTCCGGTGCAGAGCTGTCAAACTGTGGGTCCAGCTGCAGTAGATGGTCCACTGTCTTCTTGGAGCAGAAGGGAAGCTTCACGGCCTCACGTACTTTCTTAAAGAAAGACGAAATTGggtttttcttcctcttgctgTCACCTTTTTCTGACCCTAAGAGGAACAGATAGAAAACACCATTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255962 True 240 lncRNA 0.48 1 59199 59438

Neighbor

gene id symbol gene type direction distance location
tnfaip2b LOC107721214,LOC107699291,LOC107708425,LOC107582485,LOC107678518,LOC107589592 coding upstream 10872 43835 ~ 48327 (+)
exoc3l4 LOC107699315,LOC107582484,LOC107678513,LOC107708372,LOC107721209,LOC107589593 coding upstream 34070 13104 ~ 25129 (+)
LOC122332195 LOC107708426,LOC107589547,LOC107721218,LOC107678526,LOC107582488,LOC107699316 coding downstream 21487 80925 ~ 87227 (+)
mark3a mark3a,LOC107678525,LOC107582486,LOC107708428,LOC107589543,LOC107721219,LOC107698147 coding downstream 29276 88714 ~ 114288 (+)
LOC122332217 haao,LOC107586504,LOC107699283,LOC107727361,LOC107590002,LOC107707146,LOC107678607 coding downstream 179910 239348 ~ 244293 (+)
LOC122332211 kcng3,LOC107756869,LOC107590001,LOC107758134,LOC107586474,LOC108273984 coding downstream 225456 284894 ~ 290231 (+)
LOC122332182 melk,LOC107702285,LOC107709443,LOC107750464 coding downstream 374357 433795 ~ 465063 (+)
G172723 NA non-coding upstream 23868 34860 ~ 35331 (+)
G172755 NA non-coding downstream 234209 293647 ~ 351538 (+)
G172777 NA non-coding downstream 381616 441054 ~ 453300 (+)
G172804 zgc:100846,cunh9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028,LOC107585223 non-coding downstream 453136 512574 ~ 513327 (+)
G172784 adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479 non-coding downstream 494326 553764 ~ 687206 (+)
G172800 NA non-coding downstream 609925 669363 ~ 672910 (+)
G172778 mark3a,LOC107721219 other downstream 387103 446541 ~ 456080 (+)
G172737 NA other downstream 406000 465438 ~ 482032 (+)
LOC122332175 ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 other downstream 730014 789452 ~ 811855 (+)

Expression


Co-expression Network