G172777


Basic Information

Item Value
gene id G172777
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 441054 ~ 453300 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU256031
aaaataaagtCGGAGTGGAAGGTGTACATATGAGTGATGAATGCGAAATGAAAGGCCGGGAGAGATGTGGGCATGGGATGATCAGAAGAATTCAAATGATAATGCTAATCAGTGCTCGCTCAGAGATATACAAGCAGAGGACGCGTCTCTAATTTTAGCTGGGAGCTGCGAGCCGCAGCCACCATTAGTTTTTCCACAGCGCCATTGATTGGGATTCAAAGTATATCCTCTCTCTGTGGCCTGCTGGTCGTCAGCCAACACACGGCCGTGACTCACACACCGCAATAATGAGAGACCGGCCCAATCAGGCCTCTTTGGTCTTTctatgtttttgctttaattatcAGCATGGCTTTCGTTTTCTC

Function

GO: NA

KEGG:

id description
ko04530 Tight junction

RNA

RNA id representative length rna type GC content exon number start site end site
TU256031 True 365 lncRNA 0.47 2 441054 453300

Neighbor

gene id symbol gene type direction distance location
LOC122332211 kcng3,LOC107756869,LOC107590001,LOC107758134,LOC107586474,LOC108273984 coding upstream 150823 284894 ~ 290231 (+)
LOC122332217 haao,LOC107586504,LOC107699283,LOC107727361,LOC107590002,LOC107707146,LOC107678607 coding upstream 196761 239348 ~ 244293 (+)
mark3a mark3a,LOC107678525,LOC107582486,LOC107708428,LOC107589543,LOC107721219,LOC107698147 coding upstream 326766 88714 ~ 114288 (+)
LOC122332195 LOC107708426,LOC107589547,LOC107721218,LOC107678526,LOC107582488,LOC107699316 coding upstream 353827 80925 ~ 87227 (+)
tnfaip2b LOC107721214,LOC107699291,LOC107708425,LOC107582485,LOC107678518,LOC107589592 coding upstream 392727 43835 ~ 48327 (+)
LOC122332165 nccrp1,LOC107548479,LOC107757518,LOC107693441,LOC107596142,LOC107700228,LOC107746425 coding downstream 23121 476421 ~ 478867 (+)
LOC122332199 LOC107747572,LOC107666443,LOC107556922 coding downstream 93854 547154 ~ 548637 (+)
LOC122332204 adh8b,LOC107747567,LOC107666442,LOC107747568,LOC107733735,LOC107695031,LOC107585225,LOC107666441 coding downstream 113159 566459 ~ 574866 (+)
LOC122332186 metap1,LOC107556924,LOC107747566,LOC107695030,LOC107733733,LOC107666440 coding downstream 204817 658117 ~ 667257 (+)
LOC122332170 eif4e,LOC107585229,LOC107747571,LOC107556921 coding downstream 237315 690615 ~ 698060 (+)
G172755 NA non-coding upstream 89516 293647 ~ 351538 (+)
G172733 NA non-coding upstream 381616 59199 ~ 59438 (+)
G172723 NA non-coding upstream 405723 34860 ~ 35331 (+)
G172804 zgc:100846,cunh9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028,LOC107585223 non-coding downstream 59274 512574 ~ 513327 (+)
G172784 adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479 non-coding downstream 100464 553764 ~ 687206 (+)
G172800 NA non-coding downstream 216063 669363 ~ 672910 (+)
G172794 NA non-coding downstream 271927 725227 ~ 725907 (+)
G172737 NA other downstream 12138 465438 ~ 482032 (+)
LOC122332175 ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 other downstream 336152 789452 ~ 811855 (+)

Expression


Co-expression Network