G172784 (adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479)


Basic Information

Item Value
gene id G172784
gene name adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 553764 ~ 687206 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU256041
AGCATATAATAAACCCACCTTTGAAGTGCTAGCAGAACTTACCAATGGAGGAGTGGATTTCTCACTCGAGTGTGTGGGCAACACTGAAGTAATGAGGACTGCGCTGGAGTCATGTGTTAAAGGTTGGGGTGTGAGTGTTATGGTTGGCTGGACTGATGTAAAGGAATTCTCTGCAAAGCCAATTCAGCTTATATCTGGGAAAACCTGGAAAGGATCTCTGTTTGGAGgttttaaaagcaAGGAATCTGTTCCAAACCTGGTTTGCGACTACATGGCCggcaaaataaaagcttgatgAGTTCATAACTCACAAAATGAGTCTGGAGCAGGTCAACGATGCCATCAACCTCATGAAGACTGGAGAATGCATTCGATGCATCCTGAATATATCCAAATAAGAAGCTATCGTCTTCACCCAACCAGTTTCTAGGCCAGTTATATTCAGCTTATTCACTTCACCCTCTTTGCAGTATTGAGTAACAGCTGGGTGCATTCAAGGATCCTCTTTAATAGCATATTTGAGCCCTCTGCTTTATTAAGTGATTCACaagtgcatgtaaacattaatgtttaacataaaaaaCGGTTCTATTCGTTTGCAAAGGAAAATGCTTCTGAAAAGTTTTGCAAGAAAATGTTATCTGTGCcaaataaaaagacagacaaGCATGTAAATCATTTGAAGTGGTTTTGTATAACCAATTTATGAAGCCGTCAACATCATAAATTTCTCTCCTCTGAGCCA
>TU256042
GTCTGGCTCAGAGGAGAGAAATTTATGATGTTGACGGCTTCATAAATTGGTTATACAAAACCACTTCAAATGATTTACATGCttgtctgtctttttatttgGCACAGATAGCATTTTCTTGCAAAACTTTTCAGAAGTATTTTCCTTTGCAAACGAATAGAACCGttttttatgttaaacattaatgtttacatgcacttGTGAATCACTTAATAAAGCAGAGGGCTCAAATATGCTATTAAAGAGGATCCTTGAATGCACCCAGCTGTTACTCAATACTGCAAAGAGGGTGAAGTGAATAAGCTGAATATAACTGGCCTAGAAACTGGTTGGGTGAAGACGATAGCTTCTTATTTGGATATATTTAGGATGCATCGAATGCTGCAAGAAAGGAAACAAAGATTAGGACTTTactattttacaatattcaCCTCAAATACAATTGTAGATGTGATTGACAAATATACCAGTCTCCAGTCTTCATGAGGTTGATGGCATCGTTGACCTGCTCCAGACTCATTTTGTGAGTTATGAACTCATCAAGCTTTATTTTGCCGGCCATGTAGTCGCAAACCAGGTTTGGAACAGATTCCTtgcttttaaaacctttatacAACAAGAAATCAATGTACTGTGTGCACAAGCATGCACTCAAGTTCTTTCTCAAAAAGCATTAACTGCCAGCTTGAATACCTCCAAACAGAGATCCTTTCCAGGTTTTCCCAGATATAAGCTGAATTGGCTTTGCAGAGAATTCCTTTACATCAGTCCAGCCAACCATAACACTCACACCCCAACCTTTAACACATGACTCCAGCGCAGTCCTCTGAGGTCAAATATAAGGCAAttcacacatactcacacataGAACTGAAAGCTTTTAAACAAGTTAGTAAATAAATGCACCTTTCACAAATGTGTCAGGCAAGTCTTACCATTACTTCAGTGTTGCCCACACACTCGAGTGAGAAATCCACTCCTCCATTGGTAAGTTCTGCCAGCACTTCAAAGATGGGTTTATTATATGCCTTCGGATTCAGAAAATCAGTGGCACCAAAGACCTTTGCCTTCTCAAACTTCTTCTCATTAATGTCCACAGCAAAGATACGGGAGGCTCCGGCGTTTTTACAGCCCATGACTGCAGCCAGTCCTACTGCCCCCAGTCCAAACACTGCACACACTGAGCCTGGTGTGACCCAGCTGTGTTGACAGCAGCTCCATAACCGGTGGAGATGCCGCAGCCGAGCAGACACACGCGCTCGAGTGGGGCATCATGATGAATCTTGGCCACAGCGATCTGGTTGATGACGGTGTACTCAGAAAAGGTACTGGTGCCCATGAACTGCAGAATAGGCCGGCCACGGCAGGTGAAACGTGTTGTGGGATCAGACATAATGTCATGATATTTACTTGaccttcaa
>TU256044
AGCATATAATAAACCCACCTTTGAAGTGCTAGCAGAACTTACCAATGGAGGAGTGGATTTCTCACTCGAGTGTGTGGGCAACACTGAAGTAATGAGGACTGCGCTGGAGTCATGTGTTAAAGGTTGGGGTGTGAGTGTTATGGTTGGCTGGACTGATGTAAAGGAATTCTCTGCAAAGCCAATTCAGCTTATATCTGGGAAAACCTGGAAAGGATCTCTGTTTGGAGgttttaaaagcaAGGAATCTGTTCCAAACCTGGTTTGCGACTACATGGCCggcaaaataaaagcttgatgAGTTCATAACTCACAAAATGAGTCTGGAGCAGGTCAACGATGCCATCAACCTCATGAAGACTGGAGAATGCATTCGATGCATCCTGAATATATCCAAATAAGAAGCTATCGTCTTCACCCAACCAGTTTCTAGGCCAGTTATATTCAGCTTATTCACTTCACCCTCTTTGCAGTATTGAGTAACAGCTGGGTGCATTCAAGGATCCTCTTTAATAGCATATTTGAGCCCTCTGCTTTATTAAGTGATTCACaagtgcatgtaaacattaatgtttaacataaaaaaCGGTTCTATTCGTTTGCAAAGGAAAATGCTTCTGAAAAGTTTTGCAAGAAAATGCttgtctgtctttttatttgGCACAGATAGCATTTTCTTGCAAAACTTTTCAGAAGTATTTTCCTTTGCAAACGAATAGAACCGttttttatgttaaacattaatgtttacatgcacttGTGAATCACTTAATAAAGCAGAGGGCTCAAATATGCTATTAAAGAGGATCCTTGAATGCACCCAGCTGTTACTCAATACTGCAAAGAGGGTGAAGTGAATAAGCTGAATATAACTGGCCTAGAAACTGGTTGGGTGAAGACGATAGCTTCTTATTTGGATATATTTAGGATGCATCGAATGCTGCAAGAAAGGAAACAAAGATTAGGACTTTactattttacaatattcaCCTCAAATACAATTGTAGATGTGATTGACAAATATACCAGTCTCCAGTCTTCATGAGGTTGATGGCATCGTTGACCTGCTCCAGACTCATTTTGTGAGTTATGAACTCATCAAGCTTTATTTTGCCGGCCATGTAGTCGCAAACCAGGTTTGGAACAGATTCCTtgcttttaaaacctCAAACAGAGATCCTTTCCAGGTTTTCCCAGATATAAGCTGAATTGGCTTTGCAGAGAATTCCTTTACATCAGTCCAGCCAACCATAACACTCACACCCCAACCTTTAACACATGACTCCAGCGCAGTCCTCTGAGGTCAACATTACTTCAGTGTTGCCCACACACTCGAGTGAGAAATCCACTCCTCCATTGGTAAGTTCTGCCAGCACTTCAAAGATGGGTTTATTATATGCCTTCGGATTCAGAAAATCAGTGGCACCAAAGACCTTTGCCTTCTCAAACTTCTTCTCATTAATGTCCACAGCAAAGATACGGGAGGCTCCGGCGTTTTTACAGCCCATGACTGCAGCCAGTCCTACTGCCCCCAGTCCAAACACTGCACACACTGAGCCTGGTGTGAccttcacacaaaaacatgaattactAGTGTAAAGCATCTTAACATTCACCTTTTCAAGCCACAAAAACCACTtggacatttcatttcatatagtatatattaggGGTGTAACGATACACATATTGTTTATTGTACaattcatggtcattttccatttcatcaaagtgatcatccttacCACCTTGTTAGTGTGGGCTTTGGAGCGAACAGAGCACGTCATTATTTAGTCTTTTGGAACAGAATGTAATTTTCTCATTATCTTCCgctgggatgttcccatgacaagATCGCAGCAAGATGTGTGACAGCAGATTCGTTAAGGCATGGAAGCGTTGCATAAAATTACCTTAAAACAAGTTTTATGCATATTAGTTTTTAGATATtagcatgttttaaaaacattttaaatacaaaatgtatgtttatttgcaataGTTAtgttaacaacaataaaaagacatttatgacattaaagCAGCGACATCTGCTGACATCTGCCTTCGTTGTCAGAGAAGCATTGATCttaagataatgaggaaattacatcaCTTCTTTTGACAAGTGCTATAAGCCACTATTATCTATAGGCCACTATTGCAGTttgcttagggtcattgtcctgttggaagATGCACTTTCTGTCCAGTCTGAAGAGGTTCTGAAAGCGCTGAACTAGGTTTCATTAAGgctatctctatattttgctgcaaTAAGTGTTTCTTCTACTCTGATGACTCCCTCAGTCCTTGCAGCTGAAAAACAGCCCCACATTATAAGGCTGGTATAAGCACTCTTTGGGGATAGTGCTCTGCACGTTATAAACAAAGCTGGTCTCCTTCAGACATGATGCTTAGAATTAAGGTTTATCAGACCAGAAAATcttgtttctattgttttttttctgtgtcttAACTGATTGAGTCTTGTCACATCGCCTTAAAGCACAAATTGGTGTAGTAATGCAGTGAGGCTTGTCCTCCTGTATATTTATCCTATCTCCACATATGATCATGGAGCTCAACTAGAGTCACCATCAGCTTCTTGGTCACCAATCTAACCAAAGCTCTTCTCCATCAATTGATCATTTTGGCCAGGAAAccaggggcctcatttataaaatgttgcacaGAAACCATCTTATGATCATTTATCGTATAAGTGTACATTGATTCAAAGAATTAACGtgcaaacagaaaacacacataataatttagaacagcaagctgcaagaacagcttacattttcaaaaacctgaaaaaaaactgaaatgctcGGACAACAAAAAGTGCATACGTCTGTTTAGACCCTAACGTGACACTAAGCACTATATTcacaaagacagtttttaaaaatatgagcCCTGGTGTGGATTTAATCATACTTACTCAATTGAATTTGCAACAAGTTAACTTAATTCGAAGTGTAGTAACATTTTCTAGCAATACGAATGCTCCTGAGCTAAATTGTCCCAGATAGGAGTATGAATACTTATGTAATTGAATCGTTttagcttttaatatttaatacatttgcaaatatgtttaaaatttttttttgctttacagTTATGGTGTATGAAGTGTAGATTGATGTGGTAAAAAGaagcaacataacaaaatgtggggaaaaaatacCTTTGCAAAGCACTGTGTGTAAATAGTCCAAAAGTCCAAAATGTGTGAAATACTGAGGCAGCTGCCTTTGAAATGAGAAACTTCTATAAATGAGCCACTGAACTGTGAGTTAATGATAAgctaatacttttattaaaccgtaaaatattattattaaaataataataatgaggacaattaaaataactaaaaaaactatttttaatttgtttacctGCATTTCTCGTATAACCATTAACTGATGTAAACTAATTACATTagaatgtaattaatgtaattaaaaaatgtaagttactcaataatattatttttttgtttattcttcaGCTGTATAGCACAGCTGAGATAAAcattaaacctttattttgtaaaaacattcattcaagTGTGACTTAAGTGTCCACATACTTCTTGAGAGCACAACATCTATACGCACCCCAGCTGTGTTGACAGCAGCTCCATAACCGGTGGAGATGCCGCAGCCGAGCAGACACACGCGCTCGAGTGGGGCATCATGATGAATCTTGGCCACAGCGATCTGGTTGATGACGGTGTACTCAGAAAAGGTACTGGTGCCCATGAACTGCAGAATAGGCCGGCCACGGCAGGTGAAACGTGTTGTGGGATCAGACATAATGTCATGATATTTACTTGaccttcaa

Function

symbol description
adh8a Enables alcohol dehydrogenase (NAD+) activity. Acts upstream of or within cellular response to xenobiotic stimulus and ethanol metabolic process. Predicted to be active in cytosol. Is expressed in female organism; intestine; liver; and ovary. Human ortholog(s) of this gene implicated in alcohol use disorder; late onset Parkinson's disease; and pancreatic cancer. Orthologous to several human genes including ADH1A (alcohol dehydrogenase 1A (class I), alpha polypeptide); ADH1B (alcohol dehydrogenase 1B (class I), beta polypeptide); and ADH1C (alcohol dehydrogenase 1C (class I), gamma polypeptide).

NR:

description
PREDICTED: alcohol dehydrogenase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256041 False 745 lncRNA 0.40 4 553764 554790
TU256042 False 1421 lncRNA 0.42 2 683715 687206
TU256044 True 3861 lncRNA 0.38 7 553764 687206

Neighbor

gene id symbol gene type direction distance location
LOC122332199 LOC107747572,LOC107666443,LOC107556922 coding upstream 5127 547154 ~ 548637 (+)
LOC122332165 nccrp1,LOC107548479,LOC107757518,LOC107693441,LOC107596142,LOC107700228,LOC107746425 coding upstream 74897 476421 ~ 478867 (+)
LOC122332182 melk,LOC107702285,LOC107709443,LOC107750464 coding upstream 88701 433795 ~ 465063 (+)
LOC122332221 mark3a,LOC107721219,LOC107698147,LOC107582486 coding upstream 97634 446410 ~ 456130 (+)
LOC122332218 LOC107589543,LOC107708428,LOC107678525,LOC107721219,LOC107698147 coding upstream 109312 441763 ~ 444452 (+)
LOC122332170 eif4e,LOC107585229,LOC107747571,LOC107556921 coding downstream 3409 690615 ~ 698060 (+)
LOC122332167 LOC107666555,LOC107556920,LOC107747569,LOC107733787,LOC107585221,LOC107695029 coding downstream 9663 696869 ~ 718734 (+)
LOC122332161 LOC107747531,LOC107698747,LOC107666489,LOC107733775 coding downstream 206585 893791 ~ 902091 (+)
G172804 zgc:100846,cunh9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028,LOC107585223 non-coding upstream 40437 512574 ~ 513327 (+)
G172777 NA non-coding upstream 100464 441054 ~ 453300 (+)
G172755 NA non-coding upstream 202226 293647 ~ 351538 (+)
G172733 NA non-coding upstream 494326 59199 ~ 59438 (+)
G172723 NA non-coding upstream 518433 34860 ~ 35331 (+)
G172794 NA non-coding downstream 38021 725227 ~ 725907 (+)
G172737 NA other upstream 71732 465438 ~ 482032 (+)
G172778 mark3a,LOC107721219 other upstream 97684 446541 ~ 456080 (+)
LOC122332175 ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 other downstream 102246 789452 ~ 811855 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G189386 NA non-coding NC_047606.1 CM018552.1 1919470 ~ 1923367 (-)