G172794


Basic Information

Item Value
gene id G172794
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 725227 ~ 725907 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU256057
AGCCTAATGACAGCAGGAAGCCAGGAAAAGGGTTGACGAATGTGTTGTTGTTTCGAGCCGAAGCAGATTGCATGGGCGCAGTGTAACAGCAGGGGGATGTTGCAATCTGTTTGTCACCACTGACTTCTGCATTGTGAGACCGACTAGAGTGACTAGGTCTGTGAGAGCGGCCGTCATGTCTGCAGCCTGTCCCCCGCAGTCTCCCGGCGTGGCTAAGACTGAAGTGCTGGTCGAGGACTGGTGTCCCGTGTTGGCCGCGACCTTCGCTTACTGGGACAACATCCTGGGACCTCGTGTACAGCACATCTGGGCCCCCAGAGGTCAGGGGTTGTCGCTGCTCAGCGACGGAGAGGTCAC

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU256057 True 357 lncRNA 0.58 2 725227 725907

Neighbor

gene id symbol gene type direction distance location
LOC122332167 LOC107666555,LOC107556920,LOC107747569,LOC107733787,LOC107585221,LOC107695029 coding upstream 6493 696869 ~ 718734 (+)
LOC122332170 eif4e,LOC107585229,LOC107747571,LOC107556921 coding upstream 27167 690615 ~ 698060 (+)
LOC122332186 metap1,LOC107556924,LOC107747566,LOC107695030,LOC107733733,LOC107666440 coding upstream 57970 658117 ~ 667257 (+)
LOC122332204 adh8b,LOC107747567,LOC107666442,LOC107747568,LOC107733735,LOC107695031,LOC107585225,LOC107666441 coding upstream 150361 566459 ~ 574866 (+)
LOC122332199 LOC107747572,LOC107666443,LOC107556922 coding upstream 176590 547154 ~ 548637 (+)
LOC122332161 LOC107747531,LOC107698747,LOC107666489,LOC107733775 coding downstream 167884 893791 ~ 902091 (+)
G172784 adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479 non-coding upstream 38021 553764 ~ 687206 (+)
G172800 NA non-coding upstream 52317 669363 ~ 672910 (+)
G172804 zgc:100846,cunh9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028,LOC107585223 non-coding upstream 211900 512574 ~ 513327 (+)
G172777 NA non-coding upstream 271927 441054 ~ 453300 (+)
G172755 NA non-coding upstream 373689 293647 ~ 351538 (+)
G172737 NA other upstream 243195 465438 ~ 482032 (+)
G172778 mark3a,LOC107721219 other upstream 269147 446541 ~ 456080 (+)
LOC122332175 ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 other downstream 63545 789452 ~ 811855 (+)

Expression


Co-expression Network