tnfaip2b (LOC107721214,LOC107699291,LOC107708425,LOC107582485,LOC107678518,LOC107589592)


Basic Information

Item Value
gene id tnfaip2b
gene name LOC107721214,LOC107699291,LOC107708425,LOC107582485,LOC107678518,LOC107589592
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 43835 ~ 48327 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229497.1
GTTTCTTCAAATCGTTCAACGCCGAGCGAAGGAAAGAAGATCGAATTGAAATTCTGCTCAAGGGAAGAAATGACAAAGAAGTTCGGAATGCTAAACTTTTTTAGACGGCATCCCAAGAAGAACGGTATTTCAGAGGTTCCCAATTTCAAGGATAATCTACTAGCATTCCACTTTGTGAATGCAGGGAAACAGCTGATCACCCGAGAAGACCGGCTGTTTGAGTTGAGGCAGGATGGGATTGGATCCAAAATGAAGCTggtggaggaagaggaagattCAGAGGCTAGACTAGCCAAAGACTACGAGGACTGGATGAAGTCGGTGATGCAGACACTGGAAAACTCCCTGGACCTCCAAAAACCCGAGGAGCAGGAGCTACTCAAAGAAGCAGTTCAAGCCATCCTGCAGGAGGAGAAGCAGGACATGCGCTGGGCAGGCTTTGAAGAAAAGCAGCGACCACCGTGGAGACCGAGGAGGTGTAAACAGAACCACGAGGCTCTGCTGGAGCGGCTCGTTCAGAGGAGGATGGAAGAAGCCCAGTCAGACTCGGGTGATGAGATACATTCTTCCTTGCAGCAGCTGATCATTTGCCAAGCGAAACGACTGCAAGAAGACTTGCTGACAGTTGTGACACGGGTGAGCAGCTGCTACCCAGAACAGGAGAATGTGTGCCAGTTTTATGCCACACTCTACCATAAGACCCTCAGTGAAAGACTGAGAGAAGTGGCGGAGTACACACTGTGTGATGAGGACTGCGTCCTTTTACTGCAGTGGGTGAACCAGGATTACCCCAATATTCTAAATGGCAAGAAGATAAAAGATGTGATTGATCACACAAAGCTTGATCTGCTGCTCCCTGAAGATATGATTGCAACCCTGGAAGAGCAGTTTTTGACCACAGAGGAGAGGGAGGTGAACAAATGCCTTCACAAAATTCTGGAGAGAGAAGAAACGGCCTGGAAGGAAGGAGAACTTCCCCAACTGAGAGACAAGGTGTACTGCTGCGATCAGGCCATTGATGTCATCCAGTGCTTTCATAAACATGTAGAGTGCGCTCAGAAGCTGCTAGGCAATGAGGCAAAAGCACAGAGGATCACGTGCCAGATGAAACATTTTCTGACAGAttacaaaacatttaatgagaAGGTCATGAGGACTAAGCAGACAAACACTGAGGCCGTTTTGATGGTCAACCTCTCGTGCCTCATACAGTGCAGGGACTACATTACGAAGAATGCACATCTGTTCCCTGAAGATGTCAAAACTGATTGTCTCTCTTTACTGGAGACCATGACAAAAAGCAGCCATAGTTACTTTACTTCTAATATGCTTAAGGAACTTAAGGACTTGTACAGGAAGGTGGGCTCCAGCGAGTGGCTCAAGGacagtgaatgtgtgtgtgaagagctGCTGGAAAAGCTGGACAGACATACTCAGAAATTCAACGGCTGGGACAAAATGTGTCGCCAGGAGCTACTGGGTGGGATGCATAAGGAGTTTTTAGCAGAATATGTGCGGAAAATGATGAAGCAAAAGATCaaactttcaaataaaacacagcaaCAGATGGCAGCATCATCACTCTGCATAAACAGcgaatgcatacatacatacttcaCTGCAGCCGGATCAAATTTGGACTGGTTGAAAGACATTCTTCCAAATTTAGCGAGTCTGCTGAAACTACAGGATCCAGACAGTATAAAGTTAGAGTTGGTAACTCTGATGAAGCTTTACCCTGATCTCAGTGAGCGTCATATTTCTGCCTGGCTAAAACTAAAAGGAAATCTTTCTCCATCGGACCTCAAGATGATCCTGAAGAGTGTGACTTGCAGCCAGTATCAGTTCAGTGAAACGCAGGACTCTAGCAGGAGCTTCTTTTCCATAGTGAGgataagataatttttttttttcttgaaaacatTGCTTGTGTATATTTGCCTGTTTGCAATGAATTTGTACATGCTaaaattatttgtgaataaaacagcatttttactttt

Function

NR:

description
PREDICTED: tumor necrosis factor alpha-induced protein 2-like isoform X1

GO: NA

KEGG:

id description
K19989 TNFAIP2, EXOC3L3; tumor necrosis factor alpha-induced protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229497.1 True 2003 mRNA 0.45 11 43835 48327

Neighbor

gene id symbol gene type direction distance location
exoc3l4 LOC107699315,LOC107582484,LOC107678513,LOC107708372,LOC107721209,LOC107589593 coding upstream 18706 13104 ~ 25129 (+)
LOC122332195 LOC107708426,LOC107589547,LOC107721218,LOC107678526,LOC107582488,LOC107699316 coding downstream 32598 80925 ~ 87227 (+)
mark3a mark3a,LOC107678525,LOC107582486,LOC107708428,LOC107589543,LOC107721219,LOC107698147 coding downstream 40387 88714 ~ 114288 (+)
LOC122332217 haao,LOC107586504,LOC107699283,LOC107727361,LOC107590002,LOC107707146,LOC107678607 coding downstream 191021 239348 ~ 244293 (+)
LOC122332211 kcng3,LOC107756869,LOC107590001,LOC107758134,LOC107586474,LOC108273984 coding downstream 236567 284894 ~ 290231 (+)
LOC122332182 melk,LOC107702285,LOC107709443,LOC107750464 coding downstream 385468 433795 ~ 465063 (+)
G172723 NA non-coding upstream 8504 34860 ~ 35331 (+)
G172733 NA non-coding downstream 10872 59199 ~ 59438 (+)
G172755 NA non-coding downstream 245320 293647 ~ 351538 (+)
G172777 NA non-coding downstream 392727 441054 ~ 453300 (+)
G172804 zgc:100846,cunh9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028,LOC107585223 non-coding downstream 464247 512574 ~ 513327 (+)
G172784 adh8a,LOC107666441,LOC107747568,LOC107695031,LOC107733735,LOC107585225,LOC108263479 non-coding downstream 505437 553764 ~ 687206 (+)
G172778 mark3a,LOC107721219 other downstream 398214 446541 ~ 456080 (+)
G172737 NA other downstream 417111 465438 ~ 482032 (+)
LOC122332175 ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 other downstream 741125 789452 ~ 811855 (+)

Expression


Co-expression Network