G173282


Basic Information

Item Value
gene id G173282
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1266745 ~ 1267942 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU256857
GGAAAGCCTCTCGGTTCTTGCGCTGCCTGCGTCTCTCTCGCAGCAGagttttctgtttctcttcctcctcctctttctcaaGAGCACGGATGTGTTCCTCAAAACAGATCAGCGCATCTTCCTTGTCCATGTCtagcgcacacacagacacaaaggaAGATAAAAGCCTCCTCTATATCAAACACGCTCGCTCTCATTATGTGGGTTGAAAGCATCATCATGTGGAGCTGgcagtacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgctcatacTCTGTAGCTCCTCATCTTCAGCAAAGGTGGGGTTATCTAGTAGGTACTGCTGTGCCTCTGACCAAGTAGTTCTGTATGTCACATTGGCCATATTGTCCAAAATGTTCTTCAGAGCTTCCCAGTTCCTCTTCCTCAGCTGCTTGGCTTGTTCCTttttctttctttgctaaataaaacagcacatCTTCGTAGATCTCCAGCCTGTCTCTCTCTGGGACGCACGACCACACTTCCTGATCGCCAAACATCTGCTCTGCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256857 True 535 lncRNA 0.48 2 1266745 1267942

Neighbor

gene id symbol gene type direction distance location
fmnl2a fmnl2a,LOC107745270,LOC107559537,LOC107657404 coding upstream 6580 1206192 ~ 1260165 (+)
mylka mylka,mylk,LOC107734487,LOC107745269 coding upstream 62063 1152268 ~ 1204682 (+)
mettl8 NA coding upstream 458660 801991 ~ 808085 (+)
itga6a itga6a,itga6,LOC107671295,LOC107657398,LOC107745248,LOC107742949,LOC107588238 coding upstream 492231 752997 ~ 774514 (+)
dlx1a dlx1a,dlx1,LOC107742982,LOC107745256,LOC107588239 coding upstream 533134 723505 ~ 733611 (+)
LOC122332266 LOC107737514,LOC107673110,LOC107591117,LOC107593905,LOC107716156,LOC107668346 coding downstream 168286 1436228 ~ 1445999 (+)
LOC122332318 fmnl2,fmnl2a,LOC107688848,LOC107705607,LOC107566322,LOC107660092,LOC107745270,LOC107559537,LOC107657404 coding downstream 178703 1446645 ~ 1487634 (+)
sik1 sik1,LOC107715911,LOC107557923,LOC107559505,LOC107721609 coding downstream 263664 1531606 ~ 1541851 (+)
cfap91 maats1,LOC107551982,LOC107559508,LOC107721571 coding downstream 366235 1634177 ~ 1646598 (+)
nr1i2 nr1i2,LOC107715907,LOC107661291 coding downstream 379537 1647479 ~ 1668946 (+)
G173281 NA non-coding upstream 1225 1264083 ~ 1265520 (+)
G173205 NA non-coding upstream 403444 862722 ~ 863301 (+)
G173103 NA non-coding upstream 651226 506529 ~ 615519 (+)
G173083 NA non-coding upstream 854922 346582 ~ 411823 (+)
G173049 LOC107748309,LOC107691421,LOC107589979 non-coding upstream 983184 159724 ~ 283561 (+)
G173292 NA non-coding downstream 202509 1470451 ~ 1491333 (+)
G173294 NA non-coding downstream 226678 1494620 ~ 1494953 (+)
G173295 NA non-coding downstream 227158 1495100 ~ 1495413 (+)
G173410 NA non-coding downstream 274593 1542535 ~ 1552427 (+)
G173449 NA non-coding downstream 401610 1669552 ~ 1691907 (+)
G173276 NA other upstream 5288 1199337 ~ 1261457 (+)
tlk1a tlk1a,tlk1,LOC107671313 other upstream 431416 809359 ~ 835329 (+)
G173104 NA other upstream 647684 508342 ~ 619061 (+)
G173286 LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291 other downstream 106336 1374278 ~ 1393174 (+)
G173289 itga7,LOC107684006,LOC107713866 other downstream 147757 1415699 ~ 1418910 (+)
si:ch211-214p13.8 NA other downstream 322442 1590384 ~ 1598734 (+)
si:ch211-214p13.7 NA other downstream 348667 1616609 ~ 1620452 (+)
G173493 NA other downstream 646856 1914798 ~ 1917331 (+)

Expression


Co-expression Network