G173286 (LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291)


Basic Information

Item Value
gene id G173286
gene name LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1374278 ~ 1393174 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU256864
CTCGGCGCACTTGCGCATTGGTGTCTTGGATGGACACGCCTCTTGTCTCCAGTCATCCTAAATCCAATAGCCCAAACGGAACGATACCGACATCCTATGAATCCATCTCTAAGGGAAATGTTTCTTCACATGAAGACATAACTCGAGACCCGGCGTGCGACACACAGCTCCAGCCTTCGCATCTGCTTGCAGGCACGACATCTGTCCAGTGATGCAGTGGGCTGAATGCATGCAGCATCGTTTGTCATAGAGACAGTGCTGAAAGGGACAGCtcgagattttttttttttggggggggggctCAGTAAATACGGCctgttgtttgtatttatttatatatgttttactgGGTCCATGTCGTCGTTTGGTGTTCACGCTCGCAACAAGAGATACGCATGAAATCGTATTGGAATTATAAATAAGAGGAAACAAACGCAACACGTTGCTGGCTGGTCATCAGGAGATCAGGGTGTCATTCAGTCTTCATTCATGGGATGACGTCTCAGAGTGTGTCCTGTCACATCGCCCCCTGCCCCATCTCCTGTGTCCCTCTCATCTGCCCATCTGAGGTGTCCTGACGCCAGCAGGGGCTCATGAGACGCTTCGTGTACTGTAAGGTGGTGCTGACCACCTCTCTGGTCTGGGTGCTAGTGGACGTCTTCCTGCTGCTCTACTTCAGTGAGTGCAACAAATGTGACAACAAGAAGGACCACTCACTCCTGCCTGCGCTCAGAGCGGTGATGTCCCGCACCCATGAGGCACCAGGTGAAATGGGGAAGGCTGTGGTAATTCCCAAAGAAGAGCAGGAGAAGATGAAAGAGCTCTTTAAAATCAATCAGTTCAACCTTATGGCCAGTGACATGATCGCGCTCAACAGGAGTCTGCCAGATGTCCGGCTGGACggCTGTAAAACCAAGACATACCCCGATGACCTTCCAAACACCAGCATTGTGATCGTGTTTCATAATGAAGCCTGGAGTACACTTTTGAGAACCATACATAGTGCCATAAATCGCTCGCCCAGACATCTACTGCTCGAGATTCTGCTGGTGGATGATGCCAGCGAGAGAGattttctaaagaaaaaattagAGGACCATGTTGCGACTCTGGAGGTTCCAGTACGTATTTTAAGGATGGAGCAGCGATCCGGCTTGATTCGAGCACGACTAAGAGGAGCAGCTGCCACGCGAGGACAGGTCATCACCTTCCTGGATGCCCACTGTGAGTGCACTTCAGGGTGGCTGGAGCCGCTGCTTTCCCGGATCAAAGAGGACAGGAGGGCTGTGGTCTGTCCGATCATTGATGTCATCAGTGATGAGACATTCGAGTACATGGCCGGCTCAGATATGACCTATGGGGATTCAACTGGAAGCTCAACTTCAGATGGTATCCAGTTCCTCAGAGAGAGATGG

Function

NR:

description
PREDICTED: polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256864 True 1415 TUCP 0.50 6 1374278 1393174

Neighbor

gene id symbol gene type direction distance location
fmnl2a fmnl2a,LOC107745270,LOC107559537,LOC107657404 coding upstream 114113 1206192 ~ 1260165 (+)
mylka mylka,mylk,LOC107734487,LOC107745269 coding upstream 169596 1152268 ~ 1204682 (+)
mettl8 NA coding upstream 566193 801991 ~ 808085 (+)
itga6a itga6a,itga6,LOC107671295,LOC107657398,LOC107745248,LOC107742949,LOC107588238 coding upstream 599764 752997 ~ 774514 (+)
dlx1a dlx1a,dlx1,LOC107742982,LOC107745256,LOC107588239 coding upstream 640667 723505 ~ 733611 (+)
LOC122332266 LOC107737514,LOC107673110,LOC107591117,LOC107593905,LOC107716156,LOC107668346 coding downstream 43054 1436228 ~ 1445999 (+)
LOC122332318 fmnl2,fmnl2a,LOC107688848,LOC107705607,LOC107566322,LOC107660092,LOC107745270,LOC107559537,LOC107657404 coding downstream 53471 1446645 ~ 1487634 (+)
sik1 sik1,LOC107715911,LOC107557923,LOC107559505,LOC107721609 coding downstream 138432 1531606 ~ 1541851 (+)
cfap91 maats1,LOC107551982,LOC107559508,LOC107721571 coding downstream 241003 1634177 ~ 1646598 (+)
nr1i2 nr1i2,LOC107715907,LOC107661291 coding downstream 254305 1647479 ~ 1668946 (+)
G173282 NA non-coding upstream 106336 1266745 ~ 1267942 (+)
G173281 NA non-coding upstream 108758 1264083 ~ 1265520 (+)
G173205 NA non-coding upstream 510977 862722 ~ 863301 (+)
G173103 NA non-coding upstream 758759 506529 ~ 615519 (+)
G173083 NA non-coding upstream 962455 346582 ~ 411823 (+)
G173292 NA non-coding downstream 77277 1470451 ~ 1491333 (+)
G173294 NA non-coding downstream 101446 1494620 ~ 1494953 (+)
G173295 NA non-coding downstream 101926 1495100 ~ 1495413 (+)
G173410 NA non-coding downstream 149361 1542535 ~ 1552427 (+)
G173449 NA non-coding downstream 276378 1669552 ~ 1691907 (+)
G173276 NA other upstream 112821 1199337 ~ 1261457 (+)
tlk1a tlk1a,tlk1,LOC107671313 other upstream 538949 809359 ~ 835329 (+)
G173104 NA other upstream 755217 508342 ~ 619061 (+)
G173289 itga7,LOC107684006,LOC107713866 other downstream 22525 1415699 ~ 1418910 (+)
si:ch211-214p13.8 NA other downstream 197210 1590384 ~ 1598734 (+)
si:ch211-214p13.7 NA other downstream 223435 1616609 ~ 1620452 (+)
G173493 NA other downstream 521624 1914798 ~ 1917331 (+)
G173505 NA other downstream 570037 1963211 ~ 1964710 (+)

Expression


Co-expression Network