si:ch211-214p13.7


Basic Information

Item Value
gene id si:ch211-214p13.7
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1616609 ~ 1620452 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU257098
GAATCACTCTCTCCATGCCTCTCTTCTGTGTGACTGGCAGGTTAGAAACTCTGGGCACCGACCGCACCGTTTCAGCAGTTTGCAGTTTGTGGTTGTAGCTTCAGTACTGATACCGGGGCATACAAACCAGACTGAGCTTTTTAGAGAGATGGGAAGCTTTTTAAGTTGTAACCGAAGAAAGAAGAAACCTGAAAACACTGGTAAGCATGCTCTTCGGTGGATATATCCTGATGAAGCTTGCTCCAGCTAGGAGAGGGCATTACTGAGGAAGTGCCTTCTTGCACGTTTTTGACAGCGAGCTCAAGCGTGCATTCAGTTTTACTTCACGCTTCACACTAAATGCTTCTGCGTCCTTCTGTAGCTGACAgcccattaaagtgttttaGTCTCGTGACGACGTAGGCCTGTGAAGATATGATTATGGTTATTAGTACACCGTGAATAGACACACTGTTCGGTGacgtttacatttgtgttttattaaacagaTAATGACAATCAGGCAGAAACAGTAGCAGACACAAAGACAGAAGATGTGCTCTATGCCTCCATTGACCACGGTAACGTCGATCCCAACAGACCTGTTCGAGAAAACGCGGAGGACAACGACTGTGATTACGCTGTCGTAATGCTCCCTCAAAACGCAGCAAACACAGCCAAGCACAAAGGAGCAGTTGAGGACAGTTCAGATGATTACGTGCTCATGGGCTGAGCGCTGGGATGCTCCCGAACGGACGGCACGACTTTAAACACTTGTTAACTGTGTGTAGTGATATTcagcttttcaaaagttttatttatttttatttttttattatttggttgTAATAATTCGTCTAtttcaggtgtgtttttttacacagaatgtTTACAGCATGAAGTAaaatatgtttgatattttgatgcAGTTTAAGTAATTACTACCTTCATGTGCATGTACAGTGAAAAAAACGGCATATTATATGGATGCGTGTTATGGTAAtgataatacaatatttatgtagGCTTTACGACATTAAAGAGagatttttttcctgtaaaactTTAATCGGTAGGTGATAAAGTACAGCATCATTAAAGAAGAGTTGCATGTGTCTGATATGAGGAATTATGAATTTATGTTGTTGTataaatgtttatcatttaaatcattttttgtctttctgtcctCCAAAATAAAATTCCAGTACCGTCATCATATAGggt
>XM_043229637.1
ATGAAAACCACAGAACACAGGAAATACAAGTGAAATACAAGCAGACTGTTGTTTTGAGCGAATCACTCTCTCCATGCCTCTCTTCTGTGTGACTGGCAGGTTAGAAACTCTGGGCACCGACCGCACCGTTTCAGCAGTTTGCAGTTTGTGGTTGTAGCTTCAGTACTGATACCGGGGCATACAAACCAGACTGAGCTTTTTAGAGAGATGGGAAGCTTTTTAAGTTGTAACCGAAGAAAGAAGAAACCTGAAAACACTGaTAATGACAATCAGGCAGAAACAGTAGCAGACACAAAGACAGAAGATGTGCTCTATGCCTCCATTGACCACGGTAACGTCGATCCCAACAGACCTGTTCGAGAAAACGCGGAGGACAACGACTGTGATTACGCTGTCGTAATGCTCCCTCAAAACGCAGCAAACACAGCCAAGCACAAAGGAGCAGTTGAGGACAGTTCAGATGATTACGTGCTCATGGGCTGAGCGCTGGGATGCTCCCGAACGGACGGCACGACTTTAAACACTTGTTAACTGTGTGTAGTGATATTcagcttttcaaaagttttatttatttttatttttttattatttggttgTAATAATTCGTCTAtttcaggtgtgtttttttacacagaatgtTTACAGCATGAAGTAaaatatgtttgatattttgatgcAGTTTAAGTAATTACTACCTTCATGTGCATGTACAGTGAAAAAAACGGCATATTATATGGATGCGTGTTATGGTAAtgataatacaatatttatgtagGCTTTACGACATTAAAGAGagatttttttcctgtaaaactTTAATCGGTAGGTGATAAAGTACAGCATCATTAAAGAAGAGTTGCATGTGTCTGATATGAGGAATTATGAATTTATGTTGTTGTataaatgtttatcatttaaatcattttttgtctttctgtcctCCAAAATAAAATTCCAGTACCGTCATCATATAGggtgaacacaataaaaccataTATATTTACTCAA
>XM_043229638.1
TATCATGCACTCGAAGGCAAATGAAAACCACAGAACACAGGAAATACAAGTGAAATACAAGCAGACTGTTGTTTTGAGCGAATCACTCTCTCCATGCCTCTCTTCTGTGTGACTGGCAGGTTAGAAACTCTGGGCACCGACCGCACCGTTTCAGCAGTTTGCAGTTTGTGGTTGTAGCTTCAGTACTGATACCGGGGCATACAAACCAGACTGAGCTTTTTAGAGAGATGGGAAGCTTTTTAAGTTGTAACCGAAGAAAGAAGAAACCTGAAAACACTGaTAATGACAATCAGGCAGAAACAGAGACAGAAGATGTGCTCTATGCCTCCATTGACCACGGTAACGTCGATCCCAACAGACCTGTTCGAGAAAACGCGGAGGACAACGACTGTGATTACGCTGTCGTAATGCTCCCTCAAAACGCAGCAAACACAGCCAAGCACAAAGGAGCAGTTGAGGACAGTTCAGATGATTACGTGCTCATGGGCTGAGCGCTGGGATGCTCCCGAACGGACGGCACGACTTTAAACACTTGTTAACTGTGTGTAGTGATATTcagcttttcaaaagttttatttatttttatttttttattatttggttgTAATAATTCGTCTAtttcaggtgtgtttttttacacagaatgtTTACAGCATGAAGTAaaatatgtttgatattttgatgcAGTTTAAGTAATTACTACCTTCATGTGCATGTACAGTGAAAAAAACGGCATATTATATGGATGCGTGTTATGGTAAtgataatacaatatttatgtagGCTTTACGACATTAAAGAGagatttttttcctgtaaaactTTAATCGGTAGGTGATAAAGTACAGCATCATTAAAGAAGAGTTGCATGTGTCTGATATGAGGAATTATGAATTTATGTTGTTGTataaatgtttatcatttaaatcattttttgtctttctgtcctCCAAAATAAAATTCCAGTACCGTCATCATATAGggtgaacacaataaaaccataTATATTTACTCAA

Function

NR:

description
uncharacterized protein si:ch211-214p13.7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257098 True 1206 lncRNA 0.40 3 1616688 1620421
XM_043229637.1 False 1008 mRNA 0.38 4 1616629 1620452
XM_043229638.1 False 1016 mRNA 0.38 4 1616609 1620452

Neighbor

gene id symbol gene type direction distance location
sik1 sik1,LOC107715911,LOC107557923,LOC107559505,LOC107721609 coding upstream 74758 1531606 ~ 1541851 (+)
LOC122332318 fmnl2,fmnl2a,LOC107688848,LOC107705607,LOC107566322,LOC107660092,LOC107745270,LOC107559537,LOC107657404 coding upstream 128975 1446645 ~ 1487634 (+)
LOC122332266 LOC107737514,LOC107673110,LOC107591117,LOC107593905,LOC107716156,LOC107668346 coding upstream 170610 1436228 ~ 1445999 (+)
fmnl2a fmnl2a,LOC107745270,LOC107559537,LOC107657404 coding upstream 356444 1206192 ~ 1260165 (+)
mylka mylka,mylk,LOC107734487,LOC107745269 coding upstream 411927 1152268 ~ 1204682 (+)
cfap91 maats1,LOC107551982,LOC107559508,LOC107721571 coding downstream 13725 1634177 ~ 1646598 (+)
nr1i2 nr1i2,LOC107715907,LOC107661291 coding downstream 27027 1647479 ~ 1668946 (+)
LOC122332307 NA coding downstream 166094 1786546 ~ 1789324 (+)
LOC122332310 NA coding downstream 173418 1793870 ~ 1816106 (+)
si:ch211-141e20.2 NA coding downstream 199424 1819876 ~ 1829982 (+)
G173410 NA non-coding upstream 64182 1542535 ~ 1552427 (+)
G173295 NA non-coding upstream 121196 1495100 ~ 1495413 (+)
G173294 NA non-coding upstream 121656 1494620 ~ 1494953 (+)
G173292 NA non-coding upstream 125276 1470451 ~ 1491333 (+)
G173282 NA non-coding upstream 348667 1266745 ~ 1267942 (+)
G173449 NA non-coding downstream 49100 1669552 ~ 1691907 (+)
G173465 NA non-coding downstream 113071 1733523 ~ 1734755 (+)
G173454 lrrc58b,lrrc58,LOC107721825,LOC107559501,LOC102790154,LOC107715899,LOC107688662,LOC107551992 non-coding downstream 118916 1739368 ~ 1747805 (+)
G173468 NA non-coding downstream 155849 1776301 ~ 1776839 (+)
G173477 NA non-coding downstream 215378 1835830 ~ 1838337 (+)
si:ch211-214p13.8 NA other upstream 17875 1590384 ~ 1598734 (+)
G173275 fmnl2a,LOC107745270,LOC107671284,LOC107657404,LOC107737514,LOC107591117,LOC107673110,LOC107593905,LOC107716156,LOC107668346 other upstream 170614 1206216 ~ 1445995 (+)
G173289 itga7,LOC107684006,LOC107713866 other upstream 197699 1415699 ~ 1418910 (+)
G173286 LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291 other upstream 223435 1374278 ~ 1393174 (+)
G173276 NA other upstream 355152 1199337 ~ 1261457 (+)
G173493 NA other downstream 294346 1914798 ~ 1917331 (+)
G173505 NA other downstream 342759 1963211 ~ 1964710 (+)

Expression


Co-expression Network