G173477


Basic Information

Item Value
gene id G173477
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1835830 ~ 1838337 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU257146
gaattttattacaatttatagtCAAAATATTTGCTATGGTAATTATCACTAATCATTGCATACACTTTATCATCTACTACAGCAGCATTTTCAAGGCACATTCTAGTAAAGACAATTGATCTTTAATATTCGATGGACAATTTGCTCAAACTTGGCCTGACCAGGCTTGTACAGTTGTTCTGAGGAAATAGGACTaacagatcaaataaaatgttacatagaAGACACCATTATAGACATCAAACTGATACGTTAGACAGTCTcttaatgttaataaatcattataaatactTAAAGAGATCGTTCACCAAAAACGTTTTATTAGATGTTTATCTGGTtacccccagggcatccaagatgtaggagATATGGGTTCTTCAGTAAACACAAaccgttgcagtctgtcagttaTATAACGGAAGTCAACGGGGCCCCAGGCattccaaagaaaaacaaaacatacacagacGAAACCAAATGAAACCCTACTGCTCGTGACCATACATTGAGGATTTAATGCACAAAACCATCGGTctgcacaaaaatacagtatatcttTTTTACCTCTTATACACTAAAATCCTCCGCTTATTCACAACATCCGGCACGTGACACATTTTTAAGTCTTTTGCATGTTACCCATTGACTTTGATTATATGACTGACATACTGTTTCTTCAGTAAACATACTGTgtttactgaagaaacaaactcctctaCATCTTGGATACCCTGAGGATAAGCAGACAGACATccaactttcatttttgggtgaactatccctttaattccgatgcataaatcattataaaatactAACAGTGGCCAGATAGTCACATGCACATCATGGCTGGAATGTGAACATAATAACATAAGGTACCGTGTTAGTTTCTCGATGCAGGACCTGCACTAATGCACTATTGGGAGTACCAGAAATCACAGTATCAATTCTAAGAACATTAGTGCCCGAGTATTGTGATCGTAATCTCTTGCTGTTCAATGACATTCACATCGTCTAGTACAGAGTCTAAGATTAGAGCACTACAGAACGACAGCGTTCAACACTATGACGGGATCCTCAATGTCTGCTTTACTCTGGACCATCCGCAGCTCGAGCTGAGCAGGACTGGGCTTTCGATTGGGACCGGCCGCTTCTGAGATGAGCCAAGGGCAACAAGATACTGAGCTCCCAAAGAAGAGGGCAGGTCTGAGCTGGTGATGACCACCGTGTCTGGACCCATCGAGTGCAGCTGCTTCATCACCTGAAATACACCCAACAGTTTCAGTTTCAAAGTATatgttaacattattattatcatttgtttttattatttaaacttacTTCAACTGCATCTTTTTCTGAACTTATGTGTCTACCAGTGAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257146 True 1386 lncRNA 0.39 2 1835830 1838337

Neighbor

gene id symbol gene type direction distance location
si:ch211-141e20.2 NA coding upstream 5848 1819876 ~ 1829982 (+)
LOC122332310 NA coding upstream 19724 1793870 ~ 1816106 (+)
LOC122332307 NA coding upstream 46506 1786546 ~ 1789324 (+)
nr1i2 nr1i2,LOC107715907,LOC107661291 coding upstream 166884 1647479 ~ 1668946 (+)
cfap91 maats1,LOC107551982,LOC107559508,LOC107721571 coding upstream 189232 1634177 ~ 1646598 (+)
fgf9 LOC107688669,LOC107572408 coding downstream 6472 1844809 ~ 1847284 (+)
tmprss3a tmprss3,LOC107748899,LOC107713697 coding downstream 11233 1849570 ~ 1861337 (+)
wdr4 LOC107748892,LOC107661303,LOC107551989,LOC107713721 coding downstream 48519 1886856 ~ 1890960 (+)
zgc:152951 LOC107661305,LOC107748888,LOC107551988,LOC107713722 coding downstream 86310 1924647 ~ 1933749 (+)
LOC122332269 sik1,LOC107715911,LOC107557923,LOC107721609 coding downstream 156557 1994894 ~ 1999995 (+)
G173468 NA non-coding upstream 58991 1776301 ~ 1776839 (+)
G173454 lrrc58b,lrrc58,LOC107721825,LOC107559501,LOC102790154,LOC107715899,LOC107688662,LOC107551992 non-coding upstream 88025 1739368 ~ 1747805 (+)
G173465 NA non-coding upstream 101075 1733523 ~ 1734755 (+)
G173449 NA non-coding upstream 143923 1669552 ~ 1691907 (+)
G173410 NA non-coding upstream 283403 1542535 ~ 1552427 (+)
si:ch211-214p13.7 NA other upstream 215378 1616609 ~ 1620452 (+)
si:ch211-214p13.8 NA other upstream 237096 1590384 ~ 1598734 (+)
G173275 fmnl2a,LOC107745270,LOC107671284,LOC107657404,LOC107737514,LOC107591117,LOC107673110,LOC107593905,LOC107716156,LOC107668346 other upstream 389835 1206216 ~ 1445995 (+)
G173493 NA other downstream 76461 1914798 ~ 1917331 (+)
G173505 NA other downstream 124874 1963211 ~ 1964710 (+)

Expression


Co-expression Network