G173493


Basic Information

Item Value
gene id G173493
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1914798 ~ 1917331 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU257176
GTAGGACCCAGGCCAAACTGACTCATCATAGAGAAGCCGTAGAgctgttaaaacacacacacacacacacaccactgtcAACGGTGACACAGCAAAGAGCCTCTAAACGCACAAGGCCCCTGTATTTGATCAGAATGACATACTGTGGGCGCAGCCAGCAGAAGCATCACAGCACAAGTGGTGGCCCTCTTTCCCATCTTATCAGAGATCACTCCAGCCAGGATccctcctacacacacacacacacacactcttaaggGTCGTGATTTGTTTTGGCATTAGTCTGCACTGCTTTATCATAGCACTTCTTTGCAAACATGAGGTAAACAAAAGTGTTTGATTGTTGCAGACTCTAATCTTTTgtcatatttgtcatttttgatcaactgaatgcatccttattagaaaaaaaaaaaaaataaataaatcttattaaatcaaaacatatGAATGGTAGTGTTGACAACCGTAGGTAGTTTTGTACGGTTCTCAGTGGACAGAACAGTTTCacgtcattttaatatttgtctcaAACAGGCCAAGAACTGGCTTTATGACATGATTACGTCACTCTAAATACtacacattaacaaaaaaaaacaagagcgaTAACTCCACATACCAACAATGCCTCCCACGTCAAACAGAGTTGAAAGGTCTCCAGCTTTCTTGGCATCAAGGTGAGCTGAGGAGCAGGAAATACATCTTACTACAGTATATTGAAAGATTAGCTCACTAAAGCTGACAATACTCAGGCCATCTAAGGTGAGTTTGTAGATGGGGTTCCACCTTATTTTAATGGTCTACTTAAGTTTACAGGGTCACCAAGTATAAGTAACCctgtaactacatgtcagtCACATGTCGActaattctcatttatttgcagctacatgtctactaactctcagagcagactgttagggtagggtTAAGTTGACTTGCACTTGTAAAGTTTCTGACAGTATGTTGTACGTTGtagacccatcaaaataaagagttagGAGACACTGTATTAAGCAGTGTTACTGTTAATGACTAAAGTGGACTGTCGTTCACTgaaggtaacactttaaaataggtaACACCTGTTAATAATTAACTGACTTTTCctctcaataaattcttcatctgttgcttattaatagttagtaaggtagttattagATTTAGGTATTTGGTAGggtattagggatgtagaagTACAGAACACAGAATAATATGAGCTTAATTAGCactgataaatggctaatattctagcaatatgcatgctaataagaaactaacAGGCGTAAGTGTAAAATAAAGATGATATTGTTAATTCATCAGAAAAGATCTGGAAAAATGTAgcgttacatcacttgctcaccaatgaattatctgcagtgaatgggtgccgtcacaattAATGTTATGtgaggtgaaaaaaaaagaatacttcagattcattacatgtaaagtaaacgattttaaaagcttttttgttttaattttgatgctTAGAGATTACAGCTTATAAAAGTCAAAATCCGGTATCTCAATgcaatgaatctaaaatatacactttacaagttaaaaaatgtattcaaatttcTTGAGTTGTAcctgtttttattacaatatttattcatttttgttaacattagttaataaccATGCAAccgttcattgttagttcatgttagctcaaaGTGCatcaactaatgttaacaaacacaacttattACGATTCATTAGCAAATGCTGAAATTCCCTCCTGATTCAGAAAAGACAACTTCTCAGTGGAGAAAACAATATTACGAAAAGAGGACCCATATCTGCATATACAATCTGGTATCtaattttgacggcacccattcactgcagaagatccattGGTAAGCAAGTGATGCATGATTCAATTTCTCAACAAAGTaatctacatcttgaatggcGTGAAGAGGAGTccatttcagcaaattttcttttttgggcgaaatattttatagttcatatatttatgcatttataaaaataaaatgatgaaatgtattaaacagtAATGCTCTCTATATTGAATGCTGCGAGTTACCTGCTTTAGTGATGTAAAGGGGAAGCCAGAAGAGGAAGGTGTAACTGACCAGTTTGGCAAACAGCAGACAAAGAGAGAACTCCACCACTCcctgcaaacacacagcagGAGGAACGTCAGAGACGCCGTAACACACGATGAGCGATGGACAGACGGACGGGCAGCACTCACAGGAATGCGTAAAGCTCCCATGAAGCTGATGGCTGACGGTTCGGCCTCGCTCTTCACCACCACCACCTGCTGCACAGGAACACACACGCCAATGCTGTCCTGTCCCAGCAGAAGCTCCGTGTCCCAGCTCTGAAACGGTCAAACATCTCAATCAATTAACCTCTAGAGGAGTGAGTGGCAGAAAAATACACAGCGACACAAACCTGTGCTTTAGCTCCTGGCTTGTACTGCAGGTAAAGGTCTTTATGTCCATTCACACCATTCCAGTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257176 True 2514 TUCP 0.38 2 1914798 1917331

Neighbor

gene id symbol gene type direction distance location
wdr4 LOC107748892,LOC107661303,LOC107551989,LOC107713721 coding upstream 23838 1886856 ~ 1890960 (+)
tmprss3a tmprss3,LOC107748899,LOC107713697 coding upstream 53461 1849570 ~ 1861337 (+)
fgf9 LOC107688669,LOC107572408 coding upstream 67514 1844809 ~ 1847284 (+)
si:ch211-141e20.2 NA coding upstream 84816 1819876 ~ 1829982 (+)
LOC122332310 NA coding upstream 98692 1793870 ~ 1816106 (+)
zgc:152951 LOC107661305,LOC107748888,LOC107551988,LOC107713722 coding downstream 7316 1924647 ~ 1933749 (+)
LOC122332269 sik1,LOC107715911,LOC107557923,LOC107721609 coding downstream 77563 1994894 ~ 1999995 (+)
G173477 NA non-coding upstream 76461 1835830 ~ 1838337 (+)
G173468 NA non-coding upstream 137959 1776301 ~ 1776839 (+)
G173454 lrrc58b,lrrc58,LOC107721825,LOC107559501,LOC102790154,LOC107715899,LOC107688662,LOC107551992 non-coding upstream 166993 1739368 ~ 1747805 (+)
G173465 NA non-coding upstream 180043 1733523 ~ 1734755 (+)
G173449 NA non-coding upstream 222891 1669552 ~ 1691907 (+)
si:ch211-214p13.7 NA other upstream 294346 1616609 ~ 1620452 (+)
si:ch211-214p13.8 NA other upstream 316064 1590384 ~ 1598734 (+)
G173275 fmnl2a,LOC107745270,LOC107671284,LOC107657404,LOC107737514,LOC107591117,LOC107673110,LOC107593905,LOC107716156,LOC107668346 other upstream 468803 1206216 ~ 1445995 (+)
G173289 itga7,LOC107684006,LOC107713866 other upstream 495888 1415699 ~ 1418910 (+)
G173286 LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291 other upstream 521624 1374278 ~ 1393174 (+)
G173505 NA other downstream 45880 1963211 ~ 1964710 (+)

Expression


Co-expression Network