cfap91 (maats1,LOC107551982,LOC107559508,LOC107721571)


Basic Information

Item Value
gene id cfap91
gene name maats1,LOC107551982,LOC107559508,LOC107721571
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1634177 ~ 1646598 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229593.1
CTCGCGAATAAAACGCGCACCTCTCACAAGCAGACATGAGCATCTCCGTAACTCgcacatttcagaaaaaacatGAGGACGGCAAAGGATTCAGACAGCAGAGGACGTATGATTATTTATACGACCCTGTATACACGTTGTCAGCTGATGTGGATCACGCCAGGGAAAACTTTCGAGCTCAAGCCTCGGTGGATCGAGTGCGGAAGGTCCCAGAATTTAACTCCATGTTTAGTAATCTGCCGCATCACCCCCGTTTCACCTTACGCCTGGAAGCCACTGACCCTGTGCCTGCGTTCATTGATCGGCGTTGGCGGGGCTTTGCCGAGCAAAAGAGACAGGCCCTGCAGCAACTGACGGGGTTTGTGCCTCAGATACATAAACCAAGTCAAGCAGATGTGACAGGAATAGACCGCTGGAAGTTTTTCAAACGTCCTCTCATTCCTTTCTCTCAGCAGATTCCTCCTGATGTTGTATTTGCTTTGCCAAAGTCTGACCTCCTTTCTGCTTCGGATGGAGATAAAAAATGGTCCCCCGCTCCGTTCCAGCGGAGCGTGGGAGTTCAGACTGATTATCGGGAGAGTGAGACACAAACAGACCCCTTCACTCCAGACTATGCAGTTCGTCCAGGGACAGCTCCCCCTGAGCTGCTCACACTGGCCACACTCACGTGGGGCCGCGGGCTGCCCGCGGGGCTGGCAGAAGTTGAGATGATTGAGAGGGCAAGGATGAAGAGAGCTTGGGAGGCAGCTCTGCCCCCGCTGAACGACCTCTCTCAGCTGGACAAGAGGAGAAGGATGATGGAGGAGATGGAGAGGAAGGAGTGGGCATTCAGAGAAAAGGAGATAGAGAAgCTGCAGGAAGCACGGCTGACTCTGCTGGTGCAGCTCCTGCGTCAGAGGGAGGAGAAGCAGGAGGAGGTCAAGATGGATCGACTGGACGTCAGCTTTTCCCAGCACCAGCTAGAGAAGGAGGCGCGGGTTAAGAAGATACGCAGTGACTACATCGTTTCAATGCGTAAGCTGCTGGCAAAGCGGAGGAATGTGGAGGGAAAGCTGGAGAGACGTGATATTATAAAGGATTACTCAGATTATGGGTTTCAGACATATGCACCTCGAGCACGGATTGGCCAGATCTCTGAGCGAAATACTAACCGCGACGTGGTCAAGAGTCACTTTCTCAGAACGTATGAAGGTTTGTTAGAACTGGAGGCAggtctctctccatctgtcatGGAGCATAGATTCAAAGCACCGAGACCTAAAGCGACCAAAGGCTTCATCACACGCTCAGCCCGCAGAGAACTAGAGCTCATGAAGACTCATCAGGCTCTGAAGGAGGAAAAGGGTCACATGGTGGAAAAGAAGCCTCTGCGGTTTCTCTTTAAAAGGGAAAAACCTGCTCCACGACCTCCAACCCCTTCGGTGGAAGACCCCCCAGAGGGAGATGAGGAATTGGAGCTGGCTGTTATTTTTATGCAGAAGGTTCTGAGAGGAAGATCCGTGCAGAATCAGATGTTCGAAGGAAAAGAGAAACGGTTGGAACTGATCCAGGAATTGCGCACCACCCACGCACTACAGAAGGAGGAACAGGACAAGAAGGAGGTGGAAAAACAGGTCACACTCGCcctgcagagacagagagacatccAGTCTGAAAGAGAGTCTCAGACTGAGTCCTATATAGCTGGCCTTTCTGGAGGAGTGATAGTGGACATGCTGGACTTTCTATCTAAAGAGCTGGTCCGGCTGCAGGAGGAAAGGCGTATTCATGCCTTCACCCTATTGGCTGACAGAGACCGTCGTATTCGTGAGGCCGAGGAGAGCGGACGGCGGCAGATAGAGGAAAGGAGACGCAGAGAGGAGGATGAGATATTTAAACAGGTGGTCAAGGTACATCAGGACACAGTAGACATGTATCTGGAGGATGTCATCCTGGGCGCCGTTAATCAGACAGCTGATGCTCAGGCCAGGGAGGAGATTCACAGCAAGGCTGAGGAGCTGAACAACATCACCTACGCCATGGAGGAGACGAGGAACAGTCAGCAGTCTGAAGAGATTGTGGCAGAACTCGTCTACCGATTCCTCATTCCTGAGGTCCAGAAGATTGCTTTCAGAGAAAGAGTACACCAGAGCCAGAGAAGGCATCTGCGAGCGGCTCGTTCGGTCATCACTAGCAGCCCTGGATCTTCTGCGGTCTCCCAGCCCCCATCTCCATCAGACAGAGCCTCCTCAGCAGTCCTGAATGACATACTCAGCCAAGTAGAGGAGTCTGTTCCCAGAACTGTGACCCCGAGAGACCCTGGACCCGCACAAAACAATCTGACCAGTGATCCAACAGCAGAGGCTCCCGGTGGGAATGGAAAACATGCGGATTAAGACCGCAAGcagtaatcataataataataataataaaaaacattcaattctCAACCTTTA

Function

NR:

description
cilia- and flagella-associated protein 91

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229593.1 True 2435 mRNA 0.52 17 1634177 1646598

Neighbor

gene id symbol gene type direction distance location
sik1 sik1,LOC107715911,LOC107557923,LOC107559505,LOC107721609 coding upstream 92326 1531606 ~ 1541851 (+)
LOC122332318 fmnl2,fmnl2a,LOC107688848,LOC107705607,LOC107566322,LOC107660092,LOC107745270,LOC107559537,LOC107657404 coding upstream 146543 1446645 ~ 1487634 (+)
LOC122332266 LOC107737514,LOC107673110,LOC107591117,LOC107593905,LOC107716156,LOC107668346 coding upstream 188178 1436228 ~ 1445999 (+)
fmnl2a fmnl2a,LOC107745270,LOC107559537,LOC107657404 coding upstream 374012 1206192 ~ 1260165 (+)
mylka mylka,mylk,LOC107734487,LOC107745269 coding upstream 429495 1152268 ~ 1204682 (+)
nr1i2 nr1i2,LOC107715907,LOC107661291 coding downstream 881 1647479 ~ 1668946 (+)
LOC122332307 NA coding downstream 139948 1786546 ~ 1789324 (+)
LOC122332310 NA coding downstream 147272 1793870 ~ 1816106 (+)
si:ch211-141e20.2 NA coding downstream 173278 1819876 ~ 1829982 (+)
fgf9 LOC107688669,LOC107572408 coding downstream 198211 1844809 ~ 1847284 (+)
G173410 NA non-coding upstream 81750 1542535 ~ 1552427 (+)
G173295 NA non-coding upstream 138764 1495100 ~ 1495413 (+)
G173294 NA non-coding upstream 139224 1494620 ~ 1494953 (+)
G173292 NA non-coding upstream 142844 1470451 ~ 1491333 (+)
G173282 NA non-coding upstream 366235 1266745 ~ 1267942 (+)
G173449 NA non-coding downstream 22954 1669552 ~ 1691907 (+)
G173465 NA non-coding downstream 86925 1733523 ~ 1734755 (+)
G173454 lrrc58b,lrrc58,LOC107721825,LOC107559501,LOC102790154,LOC107715899,LOC107688662,LOC107551992 non-coding downstream 92770 1739368 ~ 1747805 (+)
G173468 NA non-coding downstream 129703 1776301 ~ 1776839 (+)
G173477 NA non-coding downstream 189232 1835830 ~ 1838337 (+)
si:ch211-214p13.7 NA other upstream 13725 1616609 ~ 1620452 (+)
si:ch211-214p13.8 NA other upstream 35443 1590384 ~ 1598734 (+)
G173275 fmnl2a,LOC107745270,LOC107671284,LOC107657404,LOC107737514,LOC107591117,LOC107673110,LOC107593905,LOC107716156,LOC107668346 other upstream 188182 1206216 ~ 1445995 (+)
G173289 itga7,LOC107684006,LOC107713866 other upstream 215267 1415699 ~ 1418910 (+)
G173286 LOC107566748,LOC107657405,LOC107745272,LOC107559530,LOC107671291 other upstream 241003 1374278 ~ 1393174 (+)
G173493 NA other downstream 268200 1914798 ~ 1917331 (+)
G173505 NA other downstream 316613 1963211 ~ 1964710 (+)

Expression


Co-expression Network