LOC122332307


Basic Information

Item Value
gene id LOC122332307
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1786546 ~ 1789324 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229626.1
ACTAGTTCAGACTCTATGGCACGTCTGCAAGATCCTGAGCGGACAGTAAGACAGATTAAACTCAGTCACAGACCCTAAACCCAGCGGCCTGTTATGGCAAATTTAGGAAAAACTTGTATTCTTCGTCTGGATCTCTGTGCTGTTATTATTGTCCTGATTCATGCAGatTATTCCAGATGTAGTCCAGAGCAAAATGTTCGTCAGCACATCAACAAAACAGTGTCTGTGGGGGAAACAGTTACACTTCACTGCAACAAAACCAAAGTTGATGATGATTTCGGGTGGAAGATGAACGGCTCTGTTATTTTTAGGCTGGTCTCTAATATGAACGTAACTAGAACAAACTTCAGCTCAAACAGGACTCACATCGACTCAAGATCTCCAAGAGATTTAATAATACATCAAATACAAGAGTCTGATGCTGGAAACTACACCTGTTACCCAGCGGCAATTAGATGGACATTAACAGTCACAGAAAACCAGATCAGACCAGAATCAGCCAAACAAaccaacatcatcatcatcatcatcatcatcatcatcatgtcaTTTTATGGACTCATTATGATCTGTCTGATCGTCAGAATCAGGATCTTCACTCACAGGAAGTCGAGTCAGGCGATCAACTCTAGCTCAGAAAAGCAGGATGTGAAGATGGTCTCAGACTGTGACAAACACACCATAACAGTCTGTGTCTACAGTCTTCACAGAGTTTTATCAACATCTGACATTTCAGATGAGCCTCTCCGTACCGGAAGATGTCAGTCACTCATTTTTTATGGGTGACCATCATAAGAATATTAGCCTACAGACCAGATGATCAACGTGTATGCCTCTAAAATGCTTTTtgctaattttattaaaaatatctagaaGTAAAAGTAATTTTCATACAGAATAATATGAGATATATACATtctctttaatttaaatgtattttattatgtttataatttgaataattgtgtttttatttttaactagatcttttatttatctagttaaatatatataatatacactaaTGATAGTTTATTATTGTCAACATGAATATACAGTGAGTTGTGgtgaaaatattacagaaagaAATCCAGGGTGAGCAGAGtgattaaaactaaatgcatttgtGATCTCAGCAATAATTTTGGGctgttttttttgacatattgcTGCTGTGACTAACTGCAATAAAGTCAGAACAGACTTCAGTTCTTACTTCAGATAAACACAAGGTAGCGCCATAATGCCACAATCAAATATTCTATTACGTTATCATATAGATTAATCCTTATCACAGAAGGAAGGATGTCTTAGCTATCAGGTAATTTAAGACTTTATTtatctcattaaaaatattgatcaATACACAGATACAAAGACAATGTCAAATATGGCTCCATACAAACCTGATGTTGATCCTGTGATGAGTGAGGTTCAAGGTTATGTTTTGGTGTACATATGTAATAAAAGAGTGAATCACGTTGATCCTGTGATTAGTTCTCTCTGGCTTTTTGCTTCATGCTTGTCTTATTTCACGGACTTCCTGTCCTGTAACTAATAAAAGGAaagtaaaacatgaaaaatctttcagaattattttcattttaatgttaatttaaagaAAGTGTCCAGTAATTACAAAACAATcgatttaaatgtttatgaatgaattgatgaataaattgaaattgaatattaaaatgtatttttttttgtgacatccTTTGCTTCATCACCTCACAGCAAACTAAAGGAAATGAAGATGAACTCCGGTCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229626.1 True 1779 mRNA 0.35 6 1786546 1789324

Neighbor

gene id symbol gene type direction distance location
nr1i2 nr1i2,LOC107715907,LOC107661291 coding upstream 117600 1647479 ~ 1668946 (+)
cfap91 maats1,LOC107551982,LOC107559508,LOC107721571 coding upstream 139948 1634177 ~ 1646598 (+)
sik1 sik1,LOC107715911,LOC107557923,LOC107559505,LOC107721609 coding upstream 244695 1531606 ~ 1541851 (+)
LOC122332318 fmnl2,fmnl2a,LOC107688848,LOC107705607,LOC107566322,LOC107660092,LOC107745270,LOC107559537,LOC107657404 coding upstream 298912 1446645 ~ 1487634 (+)
LOC122332266 LOC107737514,LOC107673110,LOC107591117,LOC107593905,LOC107716156,LOC107668346 coding upstream 340547 1436228 ~ 1445999 (+)
LOC122332310 NA coding downstream 4546 1793870 ~ 1816106 (+)
si:ch211-141e20.2 NA coding downstream 30552 1819876 ~ 1829982 (+)
fgf9 LOC107688669,LOC107572408 coding downstream 55485 1844809 ~ 1847284 (+)
tmprss3a tmprss3,LOC107748899,LOC107713697 coding downstream 60246 1849570 ~ 1861337 (+)
wdr4 LOC107748892,LOC107661303,LOC107551989,LOC107713721 coding downstream 97532 1886856 ~ 1890960 (+)
G173468 NA non-coding upstream 9707 1776301 ~ 1776839 (+)
G173454 lrrc58b,lrrc58,LOC107721825,LOC107559501,LOC102790154,LOC107715899,LOC107688662,LOC107551992 non-coding upstream 38741 1739368 ~ 1747805 (+)
G173465 NA non-coding upstream 51791 1733523 ~ 1734755 (+)
G173449 NA non-coding upstream 94639 1669552 ~ 1691907 (+)
G173410 NA non-coding upstream 234119 1542535 ~ 1552427 (+)
G173477 NA non-coding downstream 46506 1835830 ~ 1838337 (+)
si:ch211-214p13.7 NA other upstream 166094 1616609 ~ 1620452 (+)
si:ch211-214p13.8 NA other upstream 187812 1590384 ~ 1598734 (+)
G173275 fmnl2a,LOC107745270,LOC107671284,LOC107657404,LOC107737514,LOC107591117,LOC107673110,LOC107593905,LOC107716156,LOC107668346 other upstream 340551 1206216 ~ 1445995 (+)
G173493 NA other downstream 125474 1914798 ~ 1917331 (+)
G173505 NA other downstream 173887 1963211 ~ 1964710 (+)

Expression


Co-expression Network