CI01000003_00157111_00159800


Basic Information

Item Value
gene id CI01000003_00157111_00159800
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 156863 ~ 160244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00157111_00159800.mRNA
CTTTAAAAGGGGCGCAATAACTTAGAAACGCGTCTAAAGGCTGCAAACGGGTACTTGCAGGTACGGGTAATTGCTGAATAAGTCCAGATGCGGTAGATTCTGGAGATTCTTGATGATTTTGTCATGAGTGCGCTGAAGCGTTCGCTTGGGTTCTTCTGGGTGGTCCACTTTGAATCCAACGAAGTTAACTTGAAACTTTTTGCCGGAAGGAGACAGGAAACGATGGTCTCAAAAGAGATTGAGCAAAGATGTGGACTCTTAAATGCCCTATCAGTTCATGCCCATTTCGCCCATTTCGTTGTGTTGGTCTGGAGAATTTGTGCAGTTTTACACAAAAGCATGTGTATGGAAAGTTTGTCTGTAGTCCGTGGACCAAATGGCTGGCACTGTCTGTTGATGGGGGATGCGGAGAGGGGATCAGCTCCTGTCTTCGAAGCTTGCAGAGAGCTCCAGACACCGTCTCTGCTAAGGTCGTTCTTCCAAGAAGAGGTGCCTATCGTGGCCTTGCGTATTATAGCATATCGTGGCTTCCACGTATCTTTACCTGTTGGGGCCTTCGCATCTTGGCCTATCGTGGCTTTCGTATTCACATTACCTGGCTTATTGTCGCTCATTGCATTACATGGCTTATCGTAGCTCTTCATATTCCACAGACTATAGTGCCCCTTCGCTTACACAACCTAACGTGTCCTTTTCATATTATGGATCATCATGGCCCTTCACAGCTTATCGTGGTTCTTTGTATTACGTGGTTTATCGTAGCCTTCGCATTACACCGCCTATAGGGCCCTTTGTGTTAAATGTCCTATTGTGGCCCATTGCATTACACTGCTTTTTGAGGCTTTTTGTATTTCATGGCTTATTGTGGCTCTCTGTATTACACAAATCTATCGTGGCCCTTCTCATTACATGGCATATCGTTGCCTTCACATTACATTGCCATCGTGGCTCTTCACATTACATGGCATATTGTTGCCTTCACATTAGATGGCCTATCGTGGCTCTTCACATTACATGGCCTATCGTGGCTCTTCACATTACAAGGAAAATCGTTGCCTTCTCATTACATGGCATATTGTTGCCTTCACATTACATGGCCTATCGTGGTTCTTCATATAACTCAGCCTACCGTGGATTTGGACTAAGGACAGGGCCTATGTCAAAGAAATTTTCTATACAACTTTACATGAAACATTGCAGATCACTACCATCTGTTAATACCTTATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00157111_00159800.mRNA True 1229 mRNA 0.45 3 156863 160244
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00011191_00013812 NA coding upstream 142965 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 145896 7611 ~ 10967 (+)
CI01000003_00266342_00275005 NA coding downstream 106098 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 162623 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 195000 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 220250 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 230653 390622 ~ 408312 (+)
G22396 NA non-coding upstream 10158 145858 ~ 146705 (+)
G22339 NA non-coding upstream 120245 33154 ~ 36618 (+)
G22337 NA non-coding upstream 129293 27263 ~ 27570 (+)
G22432 NA non-coding downstream 46125 206369 ~ 206686 (+)
G22433 NA non-coding downstream 46737 206981 ~ 207272 (+)
G22434 NA non-coding downstream 47339 207583 ~ 207922 (+)
G22435 NA non-coding downstream 51938 212182 ~ 213447 (+)
G22436 NA non-coding downstream 54025 214269 ~ 214693 (+)
G22420 NA other downstream 19287 179531 ~ 189439 (+)
G22578 NA other downstream 764559 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1703024 1862854 ~ 1868137 (+)
G23870 NA other downstream 2120416 2280660 ~ 2285641 (+)

Expression

CI01000003_00157111_00159800 Expression in PRJCA010000

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.06.
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CI01000003_00157111_00159800 Expression in each Bioproject

Bar chart with 9 bars.
CI01000003_00157111_00159800 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1.
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Co-expression Network