CI01000003_00413809_00414819


Basic Information

Item Value
gene id CI01000003_00413809_00414819
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 412590 ~ 415156 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00413809_00414819.mRNA
TCATATAAACTCACGTCTTTATTTAGCTTACTGCACATGACTGTAGTCATGTAGTCGGCAACTGGTAGGAAAATGCCTTTCTATTGTTGTCTTGTATGTCTCATATTTAAAACATAATTGTTGTAATTTCTAGCAATACCTATGCAGCTTGGGTTTTTGTTGTTTTTGTGTGTACCCTGTCGACTCCATTTACAGTACTCATTCTAACTTGTGGACAGGCCAATTTATTAAAAATACATTAAAAATGCAGTTCATGCATATGACTTTAATACTCATCTTCTATGATGAGCATCTTCGACTGTACACAAAGGTATTTCATGACATTTTTGCCTGTTGTTTTGTGCCTGATGAAGATCTGTTGGATTGAAACAGTGTTTTTTATTATTTTATTTTTTTTCCCCCTTGAAATTTCCTTTAAAAAATGATATATGTTTTACAAAACCATATAAATCTAACATGAACACATTTCTGAGAACTTGGCACATGTGTTTTAAACTTGATTTTAAAATATTTTTACTTCCTTTATCTTATATTTTCATTGACCTTTATACATTCGTGATTTTTTGAGAACAATTGCAGCTGCTTGTATTATTAACTATTTATAACAGGGGTTTTCTCAACTCTGGCCCTCAAGGTTCACTTTCCTGCAGAGTTCAGCTCCAACCTTGATCAAACTCACCTGTCTGTAACTTTGTAATAATCCTGAAGACCTTGATTAGCTTGTTCAGGTGTGTTTGATTAGGGTTGGAGCTAAAGGTGTGTTCACGGCATGACTTAATTACCATAATTACAGTACGAGATTCCAATTTGTAAAAAGCATCCACGTCTTTGTAGCTCATAATTACACCTTGTAAGCTGGGAATTTTCTTAGAGCTCCTACTTGTACTACGCAACTGCTGTACCACCGGACTGCCACAGATTGATTTAGGTATTGATAGAGTAGAACGTGACGTGTTTTCATCTTGAAATTACGGTAATTACAACATGGCGTGAACGCAGCATAAGCTCTGCAGGTGAGTGGACCTCGAGAACCAGAGTTCAGAAATTTATAAATACTATATTGACTCAAAATAATAATAATAATAATAATAAACCGTAATAAGTATAGCTTAAAGCTCAAACTGGTTATAAATTGTCTGGTTGTTGGTTGTTGTGTTTTATTATTATTATTATTATTATTATATTAAAAAACTAATATTATTTCTTTTCGTGCAGCCTTATGTCAATATCACAGATAACACCCACCCTCTTCCTGAGCGGGGCTGATGCTCCTATGAATCAGGCACTTATGACCCGCAAAGGCATTACACTCATTGTGAATGTGACCCTGTCCCATGCCTGCCCTATCTACCCAGGTGTGAAGTGCATACGTGTTGCAGTGTCTGACCTCCCAAATGCCCGTCTGGGTGATCATTTTGACCATGTTTCAGCTCGAATCCACAACAACAGAGCCGGAGGAACCCTAGTGCACTGCGCTGCGGGCATGAGTCGCTCACCTGCTCTAATAATGGCCTACCTCATGAAGTACAAAGGAGTGACTCTGCGGCAGGCACATAACTGGGTTAAAGACAGTAGACCCTACATCAGCCTTAATACAGGATTCTGGACCCAACTTCTGGACTATGAGAGGAAACTCTACGAGGACACTGTTGGAGCATCAATCTCATACTATGCAAGAGAAGGCATAGGGTTAATGAATGGAAGGCTCAATAGAAAATTGAGATCAGTTTTGAACATATTTATCTCAATCAATCTAAAGCTAAGTTTGCCTGAATTTCTATGATGTGCATGAGATAAAGCCTGCAGACTTTCTTTTTTTTTTACTTTCAAACAAGACTATTACAATATTACATTTTATTACAAAATATTACAATTACATTTTCAGTTTATTTTAATTGTACTTTAACTTAAAACTCAAATTGCAGTTCTGCATCCTGCTTGCTTTCAATTTTGCAATTCAACTCTCGGTTGCAAAAACCCTGCTCACAAAGAGATATTTATTATTTTTTTTATTGTTATTATTATTTTAAATTTCTATATTATAGAATTGGCCCTGTGACACAAGGTGAGCATCTCAATGAGACAAAAAAAGTCTCAGGTTATCATTCCTCACCTTTATA

Function

NR:

description
dual specificity protein phosphatase 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00413809_00414819.mRNA True 2120 mRNA 0.36 2 412590 415156
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00390997_00406970 WDR33 coding upstream 4278 390622 ~ 408312 (+)
CI01000003_00380494_00385991 PROC, PROCA coding upstream 26499 380494 ~ 386091 (+)
CI01000003_00355244_00360638 SAGA coding upstream 51797 355244 ~ 360793 (+)
CI01000003_00323130_00336023 CLDN15LA coding upstream 76422 322867 ~ 336168 (+)
CI01000003_00266342_00275005 NA coding upstream 137278 266342 ~ 275312 (+)
CI01000003_00431473_00447759 MFN1A coding downstream 16317 431473 ~ 447950 (+)
CI01000003_00538178_00547944 PHB2, PHB2A, PHB2B coding downstream 122929 538085 ~ 547983 (+)
CI01000003_00568546_00573291 NA coding downstream 153390 568546 ~ 573869 (+)
CI01000003_00596144_00607951 NA coding downstream 180988 596144 ~ 608038 (+)
CI01000003_00644619_00663181 NA coding downstream 228499 643655 ~ 663280 (+)
G22488 NA non-coding upstream 978 410563 ~ 411612 (+)
G22506 NA non-coding upstream 39771 372551 ~ 372819 (+)
G22501 NA non-coding upstream 55776 356555 ~ 356814 (+)
G22419 NA non-coding upstream 87068 324681 ~ 325522 (+)
G22490 NA non-coding downstream 35392 450548 ~ 451101 (+)
G22524 NA non-coding downstream 53517 468673 ~ 468902 (+)
G22544 NA non-coding downstream 106993 522149 ~ 522653 (+)
G22551 NA non-coding downstream 145764 560920 ~ 561612 (+)
G22585 NA non-coding downstream 166912 582068 ~ 582405 (+)
G22420 NA other upstream 223151 179531 ~ 189439 (+)
G22578 NA other downstream 509647 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1448112 1862854 ~ 1868137 (+)
G23870 NA other downstream 1865504 2280660 ~ 2285641 (+)

Expression

CI01000003_00413809_00414819 Expression in PRJCA010000

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The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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CI01000003_00413809_00414819 Expression in each Bioproject

Bar chart with 37 bars.
CI01000003_00413809_00414819 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network