CI01000003_00431473_00447759 (MFN1A)


Basic Information

Item Value
gene id CI01000003_00431473_00447759
gene name MFN1A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 431473 ~ 447950 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00431473_00447759.mRNA
AGACGTGGAAGAGTGAGGATCTGGAGCATGTAGCTGAGGAAGAACAGTGTCTGCAGATCCAGGCCTGCTCCAGGAAACTAACTGTCATCAAAGATGTGCTATCCCGCAGACACATGAAGGTGGCCTTCTTTGGCAGGACCAGTAATGGAAAGAGTACAGTAATTAATGCCATGCTAAGGGAACGGGTCCTGCCCAGTGGAATCGGCCACACCACAAACTGTTTCCTGAGTGTGGAGGGCACAGATGGGGAGCATGCCTACCTTACCACTGAAGACTCTGAAGAGAGGAAAAGCATTGAAACAGTCAATCATCTGGCCCACGCTCTGCATATGGACAGGAACCAAGACTCTGGCTCTCTAGTCCGAGTGTTTTGGCCCAAAACTAAGTGTGCACTGCTGAGAGATGATCTGGTTCTGATGGATAGCCCAGGCACAGATGTCACATCAGAGCTGGACAGTTGGATTGACAAGTTCTGTTTAGATGCTGATGTCTTTGTGCTTGTTGCCAACTCTGAGTCTACCATAATGAACACTGAGAAGCACTTTTTCCACAAAGTGAATGAGCGTATATCAAAGCCCAACATTTTCATCCTAAACAATCGCTGGGATGCAGCTGTCTTGGAGCCAGAGTATCTGGAAGATGTGCGGAAACAGCACATGGATCGCTGTGTCAGTTTCTTAGTGGAGGAGCTGAAGGTAGTGGACCTTAACAAGGCACCTGACCGCATCTTCTTTGTCTCTGCCAAGGAGGTGTTGAGTGCCAGGATCCACCGCGCCCAAGGAATGCCAGAGACTGGCGGTGCTTTGGCTGAAGGATTCCAAGAGCGACTGATGGAGTTCCAGAATTTTGAAAGAACATTTGAGGAATTTATATCCCAGTCTGCCGTGAAGACCAAGTTTGAGCAGCACACAATCAGAGCCTGGCAGATCATTGAGTCGGTCAAGGCTATCATGGATGCCATCAATATTTCTTCAGCAGAAAAGAAAGTGTTCTCACTTGAAGAGCGTGAGGCTCTAATGGACCGGCTAGAGTTTGTGCGAAATCAGCTTAACTTCCTAACTGAGGACATCAAAGACAAGATAAAGGCCATCACTGATGAAGTGGCTGCCAAGGTGTCCAGTGCCATGGCAGAAGAGATTTGTTGTCTGTCTGGTCTTGTGGATGAATTCTGCACTGATTTTAGCCCTGCCCCAAACGCCTTAGCCCTGTACAGAACTAAACTTATGGCCTATGTGGAGGAGATAATGGTGAAGAATTTGGACCTCCGCTGTTCCAGCACTATAAACGGCTGTGTGCTGTCATCTCAGAGAGACATAATGGACACTCTACGTCCTCTGCTGCCCCCTGCTGCCCGAGGTCAACTACACATCCCCAACAGGAAGTTCACTATGACCTATGACCTGAACTTTGCTAGCCTCTGTGAAAATTTTGTGGAAGACATCGACTTTCACTTCTCACTGGGTCTTACATCCTTGGTGAATCGTTTCCTGGGGCCTGCTAAAGCCAAACAAGCTTTGAGTCTGTTGGACCAGAATTTGAAAGTCACCTCTTCCTCTGCTCCCATGAGAACCCAGACCCAGGAGGAGCTGGCTGTCTCCATGGCAACAGGACTAATCTCTCTCACTTCCAGAGCATCGGTGGGCATGTTGGTCACTGCTGGAGTGGTGTGGCGTTCTGTGGGCTGGAGGGTTATTGTACTCTCTGTGAGTCTCTACAGTTTGCTCTACCTGTATGAAAGGCTCACCTGGACCAACAGCTCTAAAGAAAGGGCCCTTAAGCAGCAGTTCGTGGATTACGCCACTCAAAGACTGCAGGCCATCTCACACATCATCAGCAGTGACTGTGGACAGCAGGTGCAACAGGAGATGGTGGCCGTCTTTGCCCGCATGTGCCAACAGGTTGACAAGAGCGAGATGGAGCTTGAAACTGAGATCCGCAGACTCAGCGCCAGGATCCAGCGCCTGGAGAGTGTCCAGAGACACTCCAAAACCCTCAGCTGGACAAATACTAAGACCAAAGTAAGCCATCTGGAGATTGATTCCTCTGAGGCCTTACCTCGTGAAACAAAAACAGGTTTCTTGTCATTTAAACCTTATAATATTGGTCTTGTTTTATTCTCAGGCACAAAGCCACTGATCTGGAGTCACAACTGGAGTCTTTTTCAGCACATTATCTGCAGATTCAGCATTAACCAGAGCAGCAAGAAACTGTGGATGAGCAGGAGTAAGACTGTCCTCCAGTGTTCACTGCTGGAACAACCCAAAATCTGCTGAATGAAAAGTTACATAGAATCTAAATTTATTTAATTTCAGTATTTCATACAAGCCTCTGGAACCCAGATTTCTCAATGACAAAAATCTAATTGTAGCAAGTTAATAATATGCAGACAACTTCCTTGATGAAAAGCCTTTATTGGTTATGAGAACAAATAGTAACAGGTGACACTGCCACTGCACAAATACAA

Function

symbol description
mfn1a Orthologous to human MFN1 (mitofusin 1).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00431473_00447759.mRNA True 2464 mRNA 0.47 17 431473 447950
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Neighbor

gene id symbol gene type direction distance location
CI01000003_00413809_00414819 NA coding upstream 16317 412590 ~ 415156 (+)
CI01000003_00390997_00406970 WDR33 coding upstream 23161 390622 ~ 408312 (+)
CI01000003_00380494_00385991 PROC, PROCA coding upstream 45382 380494 ~ 386091 (+)
CI01000003_00355244_00360638 SAGA coding upstream 70680 355244 ~ 360793 (+)
CI01000003_00323130_00336023 CLDN15LA coding upstream 95305 322867 ~ 336168 (+)
CI01000003_00538178_00547944 PHB2, PHB2A, PHB2B coding downstream 90135 538085 ~ 547983 (+)
CI01000003_00568546_00573291 NA coding downstream 120596 568546 ~ 573869 (+)
CI01000003_00596144_00607951 NA coding downstream 148194 596144 ~ 608038 (+)
CI01000003_00644619_00663181 NA coding downstream 195705 643655 ~ 663280 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding downstream 217011 664961 ~ 717379 (+)
G22488 NA non-coding upstream 19861 410563 ~ 411612 (+)
G22506 NA non-coding upstream 58654 372551 ~ 372819 (+)
G22501 NA non-coding upstream 74659 356555 ~ 356814 (+)
G22419 NA non-coding upstream 105951 324681 ~ 325522 (+)
G22490 NA non-coding downstream 2598 450548 ~ 451101 (+)
G22524 NA non-coding downstream 20723 468673 ~ 468902 (+)
G22544 NA non-coding downstream 74199 522149 ~ 522653 (+)
G22551 NA non-coding downstream 112970 560920 ~ 561612 (+)
G22585 NA non-coding downstream 134118 582068 ~ 582405 (+)
G22420 NA other upstream 242034 179531 ~ 189439 (+)
G22578 NA other downstream 476853 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1415318 1862854 ~ 1868137 (+)
G23870 NA other downstream 1832710 2280660 ~ 2285641 (+)

Expression

CI01000003_00431473_00447759(MFN1A) Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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CI01000003_00431473_00447759(MFN1A) Expression in each Bioproject

Bar chart with 37 bars.
CI01000003_00431473_00447759(MFN1A) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016110 MFN1 coding NC_007113.7 CM002886.2 5338759 ~ 5356686 (-)