CI01000003_00747650_00802075


Basic Information

Item Value
gene id CI01000003_00747650_00802075
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 746547 ~ 802681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_00747650_00802075.mRNA
CCATAAAATGAGTACTGTTTCTTATTAACGCAGCCTCGTGATTATGGTCTTTAAAGCACCTTCTATTTTTGAAGGTGCTTTTCAAAAAGCAATACATCTTCCCCTAACAATTTACAAATATGCCGTAATAAATAGACTTTCCAATTCTTACCAGTTTTTAGCGGTAAAACTGAACTAGAGTTTAAAATTAAGTTCAGTGTCGTTCATTGCCTTGTAGAGTGCTGTCATAATAAAAGTGTCCTGTCCCTTTAAGAGTGGGTTGTCAATAGATGCATATGTACAGCTCGAGCGCGAGTGAGATTGAGTAATCAAGCTCGAGCGCTGCTGCAGTTTAGCGACAGAAATGAGTGAGAATGCGACAGCGGTTATAGAGCACGATATGTTACACACTGAAATAAATTCATAAAACGTAGGAATTCCGTTGAACTTCGAGTATACACACAGGACCAACTTCGAGTGAAGTTTTGTTCAGTCACCAGACACCTGGCGTTATCGAGTGAACACGAGTCTGACAGGTAGGACTCAAAGACAGCGTGTATATCACAGATTATCGAAACATTTTTCCTACCACTTTTGTAAAAGTCAGTTTCACAAGAGCTTGGGTTTTACCGGATAAAACAAATTAAGAGGAAATTGTTTTAACGTTTCCTCATATCTCAGTCCTCGCGCCGATCTCAAGATTTCACCTGAGGAAAGTGAGTGGCGGGAATTTGACTTAAAGATTCATCCTCAGTCTAGGAGTAAGTATTTATGTGCATTCATATGATTGAGATTTGACAAAAAGCGCGTCTAATGGCAAGAGGTGTTCGGTTTACCATAACAATGAAACTCATCATGTAACTTTACAGTTCTTGTGGAGTTTAAGAAAAATTCCCATCTCTTTTTATCTAAAAGCTGCATTGTTTTTTGCGTTACTGACTCTTTTCTGTGAACAAAGAAAGACTTACTTTGTGATCAATGCTGAATTACAGTCATGCAGGACAAAAGGTTGATTCAGATGGAGAATGTATGGCTGCTTTAGAGCTCAGGGTCACACGTATAACTGCAATTGTTGCTCTTAACCTACATTGTAGCAGCATGTAAAAGTGTGAGCAAGTTGCGTAATGACTGGCATAAAAAGTGTCATTATTTGTATTATGGCAGCACAGCGTGACTCATCCAGGCCTGCAGTTAATAGCAGCATCCCTTCACCACTTAGAAATGCGGCCACATGCCAGTCTTCTCTATGGCAGGCCGAGTCCAAACTGTTTGTTAAAGTTCGGCTACGTGTGAAAAATGGAAAAGCGTACTTTCAACGAGACATTGCTAGGTCACAGCGATTTCCGCTGTTGGTTACAAGCGGTACCCAGCTCCAGCGCAATATCATCGCAGCTCCGTCGAACGACCTTCGGGGTACTTTTGGATCGACTGACACGTCGAAAGCCGAGCACATTGTTTATAGTCTGTCAGTCACTCTGCCCTCAAGCGTGATGCAGCTGGATGCCATCACTCCAGGCTCAGTGGATTTGTTTGATGACCCCAGGATACACCTGGGTCACCCTGTCCCCTCCACTCTTCACCAGAGATCAGTAATCCTCTCGCCTCGCATACCCTCTTAAACCACACCTGTTAAATACACACACCCACGCTGCCTTGATGCCAGCATGGCTCATATGGCTGCACGAGGCTTTCTAGAAAGATGCCACAAAAGCAGAGATTAGTCATCCTGCACACACACTCACAATGTGTGTGTTTATCCTGGATTCCTATCCCATGCACCCCTGTCTGTGGCTAAAGGTAACTGTAAATCTTTCTAGGAAGTAAGGATAATGGGCCGTGTTAGGGCTATGATAGTTTATTTTCCCCCTGGGTATGTTTTTTTTTTTTTTTTTTTTTAAAGTCATTCTTTATTTTAAGATTGGATTCACAGTGAATTTATTAATATACTGTATCTCTAGTCTAGTCTATTTTATACATTTGTGGATTTGTTTTCACTTTGGTTGTTTTTATGATATATACTTTAGGTTCCTATATATATATATATATATATATATATATATATATATAATATATATATTTTTTTTTTTTTTGAATTTCTGTTTTTCTGAATTCTGTTAATACAATTTTATCATCAAAATTGTCCAATCAAAATAATTGACATTTTAACCATATATTCAATCAAATTAAATCATTACATTTAATTACAACATTGCATGAATTATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_00747650_00802075.mRNA True 2204 mRNA 0.39 5 746547 802681
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00731635_00742538 TFR1A coding upstream 3938 731200 ~ 742609 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding upstream 29168 664961 ~ 717379 (+)
CI01000003_00644619_00663181 NA coding upstream 83267 643655 ~ 663280 (+)
CI01000003_00596144_00607951 NA coding upstream 138509 596144 ~ 608038 (+)
CI01000003_00568546_00573291 NA coding upstream 172678 568546 ~ 573869 (+)
CI01000003_00842413_00868623 TNK2 coding downstream 39732 842413 ~ 868663 (+)
CI01000003_00981851_01059504 TMTOPSA coding downstream 179170 981851 ~ 1059504 (+)
CI01000003_01126525_01129929 ADIPOQB coding downstream 323417 1126098 ~ 1130325 (+)
CI01000003_01140472_01168860 NA coding downstream 337661 1140342 ~ 1168900 (+)
CI01000003_01258265_01259530 NA coding downstream 455584 1258265 ~ 1259551 (+)
G22583 NA non-coding upstream 1609 744681 ~ 744938 (+)
G22585 NA non-coding upstream 164142 582068 ~ 582405 (+)
G22551 NA non-coding upstream 184935 560920 ~ 561612 (+)
G22544 NA non-coding upstream 223894 522149 ~ 522653 (+)
G22524 NA non-coding upstream 277645 468673 ~ 468902 (+)
G22574 NA non-coding downstream 15117 817798 ~ 819540 (+)
G22601 NA non-coding downstream 76950 879631 ~ 879868 (+)
G22602 NA non-coding downstream 77272 879953 ~ 880262 (+)
G22603 NA non-coding downstream 77940 880621 ~ 880871 (+)
G22605 NA non-coding downstream 79924 882605 ~ 882932 (+)
CI01000003_00390997_00406970 WDR33 other upstream 351333 390622 ~ 408312 (+)
G22420 NA other upstream 557108 179531 ~ 189439 (+)
G22578 NA other downstream 122122 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1060587 1862854 ~ 1868137 (+)
G23870 NA other downstream 1477979 2280660 ~ 2285641 (+)

Expression

CI01000003_00747650_00802075 Expression in PRJCA010000

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CI01000003_00747650_00802075 Expression in each Bioproject

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CI01000003_00747650_00802075 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network