CI01000003_02070747_02072861


Basic Information

Item Value
gene id CI01000003_02070747_02072861
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 2070747 ~ 2073389 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_02070747_02072861.mRNA
CCGTTGAAGCTGCATTGTGAGGTTTGCAGTATAGTTTCCAGCTCTGGCCAGATGCTGGGGCGTGAGGCAGGGACTGAGATCGACCAGTCCTCCTGCATATGGAGAATGAACAACGCACCCACCCGGGGCTTTGAGAGGGACGTGGGCCGCAGGACGGACCTGAGAGTGGTGTCTCACACTAGTGTTCCTCTGCTAATCCAGAAGCCCCAGCACTTCTTCGGCCAGGGGAATGAGACTGTCTATGTGGTCTGGGGACCCTTGCGCAACATGAGGCAGGATGGCAAGGGCATTGTGTACAACATGCTGCGGCAAGCGGTGGAAAACTACCCACAGTCTCGCATCTACGTCACCACAGAAGAGCGCATGAATTACTGTGACACAGTTTTCAAGAAGGAGACAGGCAAAGACAGTGGTACCAAAGGTGAGATGTCGTCAGAAGAAATCAATGGACTCTCAAGGTTATTTGAGTTCTGAAGAGCACTCGCTGTGTGCTAATGAGTCTGGCACACTGTGCGCTCATAGCGCAGGAATTAATCAGCTGTTGATATTACTCATTACAGTCATCAGACCATAACATAACACCCTCATGAATGTTTCATTTGAAGTTGAGCGCTCACAAAGTCAGCAGGTTCACTGTTACTCTCTAAAAAGCCTCCAAAAAATCTCTATTTCATGGAGAGGCTTAGATTACATTTGATCAGTCCGACTGAAATCCTGCGATAGTTCTGCCTTTCAAGAGTAATCCCCACATGATAGTCCTAATGCTGTTGTGTTATAGCACAGATAAGAGATATTCCTAAGGAGGGCTGAAGAGGATTATCGCTTATCCTACATCAATTCCTTTAGAGGAAAAGCAAGCAGATAGTGATGTCCCTAACAGTGTGCTGCAGTTTGTACATCCGGTAGGTGAGATGTGGCCATTTACTGCATAGAGAAGAGCCACTTATAGTGTGAGTGTGAGTGAATGCATGGCCATGAGCAGATGTGTGTGTAATGTCAGTA

Function

GO: NA

KEGG:

id description
K03373 SIAT7C, ST6GalNAc III; N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7C)

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_02070747_02072861.mRNA True 1002 mRNA 0.48 2 2070747 2073389
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_01982406_01992219 NA coding upstream 77903 1982336 ~ 1992844 (+)
CI01000003_01969544_01973134 COPE coding upstream 97613 1969330 ~ 1973134 (+)
CI01000003_01956459_01966449 SLC25A24L coding upstream 104292 1956401 ~ 1966455 (+)
CI01000003_01921110_01928830 TXNDC12 coding upstream 141126 1920837 ~ 1929621 (+)
CI01000003_01907347_01909263 NA coding upstream 161147 1907122 ~ 1909600 (+)
CI01000003_02101903_02151773 NA coding downstream 27426 2100815 ~ 2151976 (+)
CI01000003_02175343_02190917 ST6GALNAC5, ST6GALNAC5A coding downstream 101401 2174790 ~ 2193320 (+)
CI01000003_02259112_02344710 AK5 coding downstream 185723 2259112 ~ 2344710 (+)
CI01000003_02422051_02446833 FAM73A, MIGA1 coding downstream 348662 2422051 ~ 2446837 (+)
CI01000003_02466819_02469433 NA coding downstream 393430 2466819 ~ 2469631 (+)
G23356 NA non-coding upstream 22896 2029532 ~ 2047851 (+)
G23383 NA non-coding upstream 91154 1979029 ~ 1979593 (+)
G23379 NA non-coding upstream 117040 1953337 ~ 1953707 (+)
G23323 NA non-coding upstream 211533 1858488 ~ 1859214 (+)
G23322 NA non-coding upstream 213246 1855877 ~ 1857501 (+)
G23770 NA non-coding downstream 65899 2139288 ~ 2139544 (+)
G23771 NA non-coding downstream 66156 2139545 ~ 2139868 (+)
G23787 NA non-coding downstream 127305 2200694 ~ 2200936 (+)
G23789 NA non-coding downstream 133716 2207105 ~ 2207635 (+)
G23871 NA non-coding downstream 216957 2290346 ~ 2291021 (+)
CI01000003_01863421_01867859 NA other upstream 202610 1862854 ~ 1868137 (+)
G22578 NA other upstream 1145499 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1675533 390622 ~ 408312 (+)
G22420 NA other upstream 1881308 179531 ~ 189439 (+)
G23870 NA other downstream 207271 2280660 ~ 2285641 (+)

Expression

CI01000003_02070747_02072861 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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CI01000003_02070747_02072861 Expression in each Bioproject

Bar chart with 41 bars.
CI01000003_02070747_02072861 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016168 st6galnac3 coding NC_007113.7 CM002886.2 9330146 ~ 9489611 (-)