CI01000003_02466819_02469433


Basic Information

Item Value
gene id CI01000003_02466819_02469433
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 2466819 ~ 2469631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_02466819_02469433.mRNA
ACTGATCAATTGTTTGTCTACAAAGAAAAAACTCTGGAAGAAAGTCTTGTAGAAGGTTGCTGTGGAATAAAGCCTAACAACAGATATGAGGTGAAGGATGACATCGGGAACAACATTTTTACTATTCTTGAGGACAACGATTGTTGTAACAGGACTTACTGTGCTGCAGCACGTTCCTTCATAATGAATGTTTTTAACAACTCAAATCAAGAGATCATCAGACTGGTGCGACCATTTGTTTGCAACTGCTGCAAAAATGAGCTGGTGTCTTTGAATGGGGCAGCAATAGACAGATCATTTGGCAAGATCGTCAGACCTTTCTCATGCTGTGGACCAAATGCAGATGCAGATTTTGTGCTGAGGTTTCCAAGAAACTTGGAAGTCAAAATGAAAGCTACACTATTAGGGGCCTGCATACTTATTGAAGGTGAGATTGAGGTTGCATGTTTTATCTTGAAGTGAAGCAAACACCACAGTAACCACAAACACCTACAGCTGAAGTTCTTAGTAATTCTTCTGATGTTGAAAAAAAACAAAAAAAAAAAACACCCCAACCAGCATTCTGGGTTGCTCGTCATGGAAAATCCAGACAGAATGCACCAGTTTAAAGCTTCTGTTGTCTTGATGGGTAAAACTTATTTTTTCAGACCATTGACCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_02466819_02469433.mRNA True 660 mRNA 0.39 4 2466819 2469631

Neighbor

gene id symbol gene type direction distance location
CI01000003_02422051_02446833 FAM73A, MIGA1 coding upstream 19982 2422051 ~ 2446837 (+)
CI01000003_02259112_02344710 AK5 coding upstream 122109 2259112 ~ 2344710 (+)
CI01000003_02175343_02190917 ST6GALNAC5, ST6GALNAC5A coding upstream 273499 2174790 ~ 2193320 (+)
CI01000003_02101903_02151773 NA coding upstream 314843 2100815 ~ 2151976 (+)
CI01000003_02070747_02072861 NA coding upstream 393430 2070747 ~ 2073389 (+)
CI01000003_02510102_02514782 NA coding downstream 40471 2510102 ~ 2514969 (+)
CI01000003_02534151_02541110 NA coding downstream 64520 2534151 ~ 2541444 (+)
CI01000003_02551541_02556812 NA coding downstream 81910 2551541 ~ 2556836 (+)
CI01000003_02781537_02783192 NA coding downstream 311802 2781433 ~ 2783270 (+)
G23913 NA non-coding upstream 5720 2460834 ~ 2461099 (+)
G23898 NA non-coding upstream 9953 2455009 ~ 2456866 (+)
G23893 NA non-coding upstream 12638 2453578 ~ 2454181 (+)
G23871 NA non-coding upstream 175798 2290346 ~ 2291021 (+)
G23789 NA non-coding upstream 259184 2207105 ~ 2207635 (+)
G23921 NA non-coding downstream 9456 2479087 ~ 2479378 (+)
G23925 NA non-coding downstream 21092 2490723 ~ 2491060 (+)
G23927 NA non-coding downstream 31024 2500655 ~ 2500879 (+)
G24032 NA non-coding downstream 94278 2563909 ~ 2564426 (+)
G24058 NA non-coding downstream 145455 2615086 ~ 2615402 (+)
G23870 NA other upstream 181178 2280660 ~ 2285641 (+)
CI01000003_01863421_01867859 NA other upstream 598682 1862854 ~ 1868137 (+)
G22578 NA other upstream 1541571 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 2071605 390622 ~ 408312 (+)
G22420 NA other upstream 2277380 179531 ~ 189439 (+)

Expression

CI01000003_02466819_02469433 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
End of interactive chart.

CI01000003_02466819_02469433 Expression in each Bioproject

Bar chart with 29 bars.
CI01000003_02466819_02469433 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network