G22339


Basic Information

Item Value
gene id G22339
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 33154 ~ 36618 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25183
CGGACATATCTTCTCTTTGTCTGCACCTGAGCATGAGGCTATGAAAAAGTATCTGTCTGAATCTCTGGCAGCAGGTCTGATTCGTCCCTCTTTTTCTCCGGAAGGTGCAGGGTTCTTTTTCGTGAATAAGAAGGATGGCTCTTTGCACCCTTGTATTGACTATCGGGGGCTGAATGACATCACTGTTAAGAACAGGGACACGTTCAGCACGTCAGGTGGGTGCCTCAGCAGCTGCTAGAGAATTCATCGTTCGTGAGGGTGGAGAAGTGTATTTTCATGCCCAGTTGGTTTCGCTCCTGGGGTCTGTCATCTCGGCGGAGGGGATTCGCATGGACCCTGCGAAGCCCGGCTTTCTTATGCCAGTGATTCCTGCTACCTCTGGCTAGTGATTTGCTCCGATGGATTACTTCTATCTGTTCCTGTCTTCGCTTCAACAAGTGTCAAGTGATCATCTGTCCGGTTCTGAACCTCTTCCTGTTCTTGTGGACTTTGTAAACTGTCCGCCAGCTCAGATTTGGATTTTTCCCTGTTCCTGTCTATGTGAGCTGTCTTACCTGAGGGACGTGCTCATCTGTTTGCCTCCTGACCTCTTCTCTGTGATCTAGCCGCCCATATGGACTTTGATCTTTTGCTGGGACACTAATTGACTGTTATTACTCAATAAATTTTGAGTCGCATTTCTGTATTTTTGTCTTTTTCCTTGAGATCCCTGACATAGTCAACATGAAATCAAAGTTGACCATATTTGCTTGCTTTATATATGCTGTTGGTATTGTTGTGTGCGATTCATCAGTGCATGTTATTTCAAATAAAAAATGGTTTGTCTTGTTGTGTAACTTAAAATGATTTTTCTTTCTGGCATTTTTTTTATAGTCCTCTAATTTTTCTGCCAATTGTGTCGAACCATCTGGTTCCATTCTGATATATAACACCCACTTTTCAAAATATAGAAAATTCCCTGATGAATACACAAGCCGTACTTACTCCCAAGGTGTCAAAAACTGAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25183 True 1010 lncRNA 0.43 3 33154 36618
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00011191_00013812 NA coding upstream 19256 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 22187 7611 ~ 10967 (+)
CI01000003_00157111_00159800 NA coding downstream 120245 156863 ~ 160244 (+)
CI01000003_00266342_00275005 NA coding downstream 229724 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 286249 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 318626 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 343876 380494 ~ 386091 (+)
G22337 NA non-coding upstream 5584 27263 ~ 27570 (+)
G22394 NA non-coding downstream 101275 137893 ~ 160460 (+)
G22396 NA non-coding downstream 109240 145858 ~ 146705 (+)
G22432 NA non-coding downstream 169751 206369 ~ 206686 (+)
G22433 NA non-coding downstream 170363 206981 ~ 207272 (+)
G22434 NA non-coding downstream 170965 207583 ~ 207922 (+)
G22420 NA other downstream 142913 179531 ~ 189439 (+)
CI01000003_00390997_00406970 WDR33 other downstream 354395 390622 ~ 408312 (+)
G22578 NA other downstream 888185 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1826650 1862854 ~ 1868137 (+)
G23870 NA other downstream 2244042 2280660 ~ 2285641 (+)

Expression

G22339 Expression in PRJCA010000

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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G22339 Expression in each Bioproject

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G22339 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network