G176653


Basic Information

Item Value
gene id G176653
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047825.1
NCBI id JAEQBD010000170.1
chromosome length 69096
location 50377 ~ 51481 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU261989
tattcatTGAAACTTAAAAATACTGTAGCATTACCAATTCATTTTctaaagatttgtttttctcGCCATCTTCCATACTTGTGGTACAGACTTTAACACAACTGGCGCGACTTTACAGCAATACccaaaacaacatgaaatgtGCTTCAGTCCCAATGTGTAAATAGTTACATAATAttcaatgtatatataaaaatataatgtggaTTTGTGTCTCTAAAATACAAGAAAGTTTCCAGATGTTCTTACCAGATTGACAGTGTAAGTAAAGGGTGTAACAGCTCTTTATCTATCTGTACATTCAGCTATATAGTGCAGCTATAAAACGAGCAGGTAAAGCCTTAAAGGATGTAAGTAGTGCCAGAGACCTTTATAGTTTCCAGTTGTgtcctttcattaaaaatgtgctgTGGCATGCAAAACATACTCTCAACAGTACGAAGAGAAGAAATAATGCATACTTGATCTGAAGTATTTTGTACTATGCATTTCATGTTTAGAAACGGTAAGAAAACCGTTTTGtcttatttatgtttgtatagCAGGATTTAGTGGTTAACGATTTGATTAGCTATTGCATATGCACAGAAAGGTGTGGGTAAGTTAAATCCACTCCTATATGAAGTCTTCCATTACTGGCATATTTCGAGTGATGAATAATATTGCTTTATTCATATGGTGTTCAATGAACATTCATTATACTTTGTAATTGATGATGCAGTATTGGTGCCATAgtagcattttatttgtgtttcgcAATGCACTgagaaatatcttaaatttaaGATAACATTAAATCCTGCCAAATTTTCATGGCTTATCAACTCTATATGACTAAATTGTATTCATGTCTGTGGTGTAAAATATGAACTCTGTATCACGTTATGTAATCTATTTATTAATCGGTTCAAAACTGTATTATCAAATAAAcctcaaatgttttattttcat
>TU261990
aaaagtttataagaattccaaattaaaaatatgaaaagccACTATTTGGAAATGtagcatttgttattattttattaatctgaatataaacagagatttttttttcccttttaaataatagtaaaaaacaGGGTTTGGTagatattttaggttttattcatTGAAACTTAAAAATACTGTAGCATTACCAATTCATTTTctaaagatttgtttttctcGCCATCTTCCATACTTGTGGTACAGACTTTAACACAACTGGCGCGACTTTACAGCAATACccaaaacaacatgaaatgtGCTTCAGTCCCAATGTGTAAATAGTTACATAATAttcaatgtatatataaaaatataatgtggaTTTGTGTCTCTAAAATACAAGAAAGTTTCCAGATGTTCTTACCAGATTGACAGTGTAAGTAAAGGGTGTAACAGCTCTTTATCTATCTGTACATTCAGCTATATAGTGCAGCTATAAAACGAGCAGGTAAAGCCTTAAAGGATGTAAGTAGTGCCAGAGACCTTTATAGTTTCCAGTTGTgtcctttcattaaaaatgtgctgTGGCATGCAAAACATACTCTCAACAGTACGAAGAGAAGAAATAATGCATACTTGATCTGAAGTATTTTGTACTATGCATTTCATGTTTAGAAACGGTAAGAAAACCGTTTTGtcttatttatgtttgtatagCAGGATTTAGTGGTTAACGATTTGATTAGCTATTGCATATGCACA
>TU261991
tattcatTGAAACTTAAAAATACTGTAGCATTACCAATTCATTTTctaaagatttgtttttctcGCCATCTTCCATACTTGTGGTACAGACTTTAACACAACTGGCGCGACTTTACAGCAATACccaaaacaacatgaaatgtGCTTCAGTCCCAATGTGTAAATAGTTACATAATAttcaatgtatatataaaaatataatgtggaTTTGTGTCTCTAAAATACAAGAAAGTTTCCAGATGTTCTTACCAGATTGACAGTGTAAGTAAAGGGTGTAACAGCTCTTTATCTATCTGTACATTCAGCTATATAGTGCAGCTATAAAACGAGCAGGTAAAGCCTTAAAGGATGTAAGTAGTGCCAGAGACCTTTATAGTTTCCAGTTGTgtcctttcattaaaaatgtgctgTGGCATGCAAAACATACTCTCAACAGTACGAAGAGAAGAAATAATGCATACTTGATCTGAAGTATTTTGTACTATGCATTTCATGTTTAGAAACGGTAAGAAAACCGTTTTGtcttatttatgtttgtatagCAGGATTTAGTGGTTAACGATTTGATTAGCTATTGCATATGCACA

Function

GO:

id name namespace
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU261989 True 951 lncRNA 0.32 1 50531 51481
TU261990 False 741 lncRNA 0.31 1 50377 51117
TU261991 False 587 lncRNA 0.33 1 50531 51117

Neighbor

gene id symbol gene type direction distance location
LOC122332905 dnajc16,LOC107664231,LOC107697907,LOC107599523 coding upstream 214 43703 ~ 50163 (+)
LOC122332907 NA coding upstream 10151 35761 ~ 40226 (+)
LOC122332906 NA coding upstream 14638 33397 ~ 35739 (+)
LOC122332904 NA coding upstream 17514 30868 ~ 32863 (+)
G176652 LOC107664115,LOC107714979,LOC107751829,LOC107697909,LOC107599510 non-coding downstream 4881 56362 ~ 58548 (+)

Expression


Co-expression Network