G22420


Basic Information

Item Value
gene id G22420
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 179531 ~ 189439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25282
CTGCTTTCGGAGGATGCATTCCAAGGTAGGGCATCAAGGCACGTCCAAATCTAAAGTTAGCTTCACTTCCTGTCTCATGAGATACCTTCATCTGATCAATTTTTGAAGGCAGCATAGATGTATCCTTTGCTGCTTTTGATATCCCTTTGATATGCCTGTGCTTTCCATTCTGTGACAGTTGAGCTAAAAAAAATAACGACAGCATCTGAAAGCTGCGGTTGGTGGTCAGTTTTTGTGTAAATGTACGTTATTGACCATTGTTGTCCACTTTTGATGTCTTGAGATAAATTACTATTGTAGTAATTAAATATTCCCTTAGTTATCCTGTATTTTCATATATTTTCATATATATAGATCATTAAACCATCACGCTGCCTCAGAAGTCTGTCCAAAATCAGTTTTGTGAGGTGCCTTCATGCGCAAACGCTGCCTGCAAAGTCATTGCCTGATAGGGCAGCAAGGCAACAAGTCAGCTGCCTAAGTTTTCGGATGCAGCCATTATAAATTCAAAAATTGCCTCCTCAAAAAGCTTAACGACATGTTTTACAGCAGTGATATCAAATGCTCATTGGCTCTCACCTGCTTCGTCACAGATTGCAGCATGTCGTGTTTCGGTTGATGTGCGTTTGCATGAGAAATGTGCACCTTCACCGAAGTGGATTGGGATAATAATTTCAGTGATTGACAACTTAAATTATGCTCTGTACCTCATACAAAATTATTACATACCAACACAGAGGACTGCAACTGCAACACATCATTATTTGGACTATACTTTTGGTCCCACTTTTGACATTTTTGCAATAAATAAATTGTGATTCCACTTGTCTGTTATGTTTCTTTATAACTGTACATATTTTTAAGAAATGGCTATGGGTAGGTTTAGAGGTAGGAGTGGGATTAGCGGCTCAAAATATAATTTTAATGCTATATTGTTACTAAAATTGTACTACTGTCAAGACATAGATGGAGGCAGATGGGTAAGTTTACACAGATGTTTATTGGAACAGAGGCACGAACACAGGTGAAGGAAATTGCAAGTGAGTAGTTGAACAAGCACTTCAAAACAGTCACTTAGCTGACGGTAATGAGAGTCTATTTGCAGGTTTGAGAAGACGGTGTGGAGCTAACGACTGGAGACAGAAGACGATGGGAGGAAGACACCGGTAAGTAGTGGGTAGCAGTCCATGTAAGTCTGACGAGACCAGACACTGAGTGCAGGGAGTGAGTGGCTTAAGAGTGTTCCTGGTGATGAGGTGCACGTGTTGGTGATTAGAATTCAGGGGATTGTGAACATGTGGATGAGCATGAAGATCTGGGGTGCTTCTCAATTCTTATTTGTGCATCCTCGTTTCCTTTCCTCGCGTCTTAGCTCCACCCCTTCAGGATGCGAGGGAAGGACACAAGGAAAAGACGCGAGGATGGAGGAATTGAATCAAGTGAAATGATATCCTCGCTCCCTTTATTGTCACTTCAAAGCGTCATCAGCTGCACTCGAGGGATCTACCCATATGTTGTTAAAGTTTGGTTATTTAAAAAAAAAAAAAAAAAAAAATTGTAATAAATATTAATAAACCAAGATGTCCTGTTGAAATATGTGAGATATAAAGTTTATTTAAACTGCAAAAGTAAAGAATACATTTAAATTATTGTGACAGATATGAAGGGGGAGGAGAATTTATACGTGCATCAGGTTTCTCGATGAGAAAGACTTCCGCAAAGGATACACCTCACTCATGACACCTTAGGAAGCTTCCTCACTCCTCGTTCCTCACCTCCTCATGGTGCATTTAGAAAATTGAGATGTCTTTCAAGATGGATGAGCTTGATCGGTTTCCGGGTCATAGGATGGAGGACAGAGGAGCGAGGAAACAAGGAGGAATATTGAGAAGGACCCCTGGTGACGATGGTGCTGGTTGTGACTCCGTAACAGTACCCCTCCCCCCCCCCCCAGGGTTTACCTCGACCCCGGGTAGCAGGGCGGTCCGGATGTTAAGCGTGGAATTGAGTGAGAAGTGAGGAGTCGAGGATGTCATGACGGTTGACCCAGGAAGTCTATTTGGGGACCCCGTCGTCGAGAGTCGAGGATCGCCCGCACCTGGTAGATGGCTTCTTCCTCAGCGATGTTGGGAGGAGGTACCGCATCGTCACCAGGATCTGTGGATGGAGTTTGTGGGGTTTTAACAGGGATACATTAAATGAAGGTGAGATACGATACTGTGCTGGGAGTTTTAGCCGGTAAGTGACTTTGTTGAGCTGCCTCTGTATGTTGCCAACCGCTTGCTGAACACATCCTGGAACGCCCGGTATTCTGGAGGAATTTCCACTTTGAGGTCAGTTTCTGGACTTTCGATGGAGGTGGAGAGAACAGGAAGGATGTTGGAATCGGAAGAAGATGGTTTTAGATTCGAGGAGGATTTTCTAATAGGAGACAAACAGTTTAGGAAACATTCTTCACTCCATTTGAGGATCTCACCGGTGTTCCATTGAATGTGCGGCTGGTGTTGTGTAAGCCAGGGGCGTCCCAGGATGATGTCCGCAGTGGAACCTTCCAGCACCATGAATGTGATTTCCTCTGAATGTAAGCATCCGATGCGGAGCGTCAGTGTGGGGGAGAAATGTCGAACGTGACCACGGCCCAATGGCTTTCCTTGTATGGTGTGGATACGTAGATCCTGTTGGCAGCGTTTACGACGTACATTCAGTTTCTGGAGAATCTGGTTGCTAAAGAAATTCCCAGAGGAGCCAGAATCAATGAGGGCTTGCGCTGAAACGCAGACATGAGAGTTAATGACATGTACAGGCGTTCTCGTGAGAGGTGCAATGCGAGCGGGCAGGTGGATAGTACCCACTGCTGGGCGTGGTGGTCGGACGGGACAGGTCGCGATCACATGGTCCTCTCCCCCACAGTACAGACAGAGATGTTGTAGGATCCTTCTGCTCCTCACGGGTCAGGCAATTAGAATCAACCTGCATGGGTTCTGGTGCCGGAAGGGCAACAGCTGGTGTGGCGGGCAGAGGATTGGCAGTGGGTGTGTGTGGAGCACATATGCAGAAAAGCATTGGGCAACACGGATGTTTTTTTTAAGTAAATTCTCCAGGCCCATAGTGCCATCGTACACGACCATTAATTGTTTAACTTTGGGGCTCGAGCCTTGGCAAAAGGCAGTTATCAGAGCCGTTTCATTCCAGCCGCTGGCAGCCGCCAGAGTGCGGAAACGGAGGGCATACATACTCAGATTCATTGCTTTGTCGTAGATTAAAGAGTTGGTCGTGTACAGAGAGCTCAGCAGTGCATTGTCTGAATACCTCTCGGAAGTGGGCGAAGAAGGAGTTAATGGAGGATGTAACAGGAGCATTGGATTCCCAGAGGGGTTGAGCCCACTGTAATGCTCGTCCGGTGAGTAGTGAAATGACAAATGCCACCCTGGATTGTTCAGTGGCGAACAGCTGAGACTAGGCTTCCAGATAGAGGGAGCACTGTAGAATAAACCCACTGCAATCCTCCGCCGCGCTGGTGAATGTCGCTGGTCGGGCCATGGGACTGACAGAGGCAGCTGGAGATGAAGCAGCGGGTGTTGGGTGCTGGAGTGCGAGGCAAATGGCGTAGAGAAGATCAGCCGGGACTGTGGGTGCAGTGCTTGTGGCAGGTTGTGGGAGTGAGGATCGTACTGCGTCGACCAAAGTGGCGAACGGGTCCGCAGTACGATCCCCACCTGTGTCCGAGGTGCTCTGCATGAGGTCTGGTCTTCTGTCAGGACACAGACGGAGGCAGTTGACTAAGTTTACACAGATGTTTATTGGAACAGAGGCACAAACACAGGTAAAGGAGATTGCAGGTGCGTAGTTGAACAAGCACTTCAAAACAGTCACTTAGCTGATGGAAATGAGAGTCTATTTGCAGGTTTGAGAAGACGGCGTGGAGCTGACGACTGGAGACAGTAGACGATGGGAGGAAGACACTGGTAAGTAGCAGGTAGCAGTCCACGTAAGTCTGACAAGACCAGACACTGAGTGCAGGGAGTGAGTGGCTTAAGAGTGTTCCTGGTGATGAGGTGCAGGTGTCGGTGATTAGAATTCAGGGGATTGTGAACGAGTGGGAGGAACGTGAAGATCTGGTGACAATTGTGCTGGCTGTGACTCCGTGACAACTACACATTTCTGTCCATTACGTTTTATATTTTCTTTTTATATTCTCTATAAAATGGTTATGTTTAGGTTTTGGGTAGAGTTTAGGTATCTAAAATGTGTCTATAAAATTGTAAAAAAGCAATTATACAAATATCTTTATGATATAAAAGATTTGTAAATATTTTGTTTTTTAGATGAAAAACGTAATAATATTTATGTAATAATGTTCATATTGTACTTTTTACCATCTATCTATATTTGTCTATGTACAAAGAGTATGTTTTACCTGTAATTGTTGCATATTAATACCTATGGATTATCATAGTATCTTGCTGCTACTGCTTTACAGCAGAATTTGAACTTGTCTCAAATTTGATGAAGTTCATGTAATTCTGTACTTTCTTGTATATTATTGTGAAGCTGCTTTGAAACAATTTATATTGCATAAAGTGCTATAAAAATAAAGGTGACTTGACTTGTTTTCCCTTGTGCGTGTTGTTGTAACCCCTGTTTTGGATTTGTCCTGTGTTTCTGTTTTCCTCCGAGTTACTGGTTTCTGGTTTTATTTATATTTTGTGGTTTTGTTTCATTAGAGTTATCTGTTTCCTGGCTTTTTTTCTCTCTTTTCATTTATTAAAAACCTTTGCACTTCAAGCCACTATCCTCTGCTTGCCTTCCTTTATCCAGCCTGCCCGTTGTTACAAGTGAAGAGGGAAAGATTTAGATTTTGCTTGCTGAATTATTAACTGCAGTTTACTGATCTCTGTCTGTGGAACAGTGGCCGGTTGCATAAACCACTTAGACTAGTCTTAAAAGACACTATTTAAGACACTATTTTTTTTTAAATAACTATTAAGACACTATTTTTTGAAGAGTGGTCCTAATTTTTTAAAGTCCGTTACATAAAAAGGTAGATTGGTGTAATTGGAATTGGAAAAATAACATTGATTACCCCTTGGTTAACTGCAAGTTGGTCAAACTAGTTCTTAAGACACAGTCTTAATATAGTGACTAAGTTTATGCAACTGGCCCCTGGACTGACATATAAATGTAAGGATTAGAGGTGGAAAGGACATATCAGTTCAGCTGAGTTAAAGAACAGCTTGAGGCTATTCCAGTAACTCCCTTCAGCTGTCTTTCATCTCACTCCACACCTTATTTTCAATCTGCAAACAGGACAGTTTTACACATAGAATCACTTGTTCTCTGAAAGACTCCACTTTCCCTGAGATATAAAAAAAGACTTTGCACTCCCATTTCCCTGTTGGATTTCAATAGGGTAGATGGTGGATATGAATAGATAACAGTAATGTCCTCTTATCCACTAACTGTGTGTAAAGTCAGTGCATGAATATTTCATGCAGAAATCACAATTCATCATGGGTTCACTTTTCAGTTTTTCACTTTTACATGTCACTTTTACACACATTTATTGAATAATTGTGCTTTTGTTAATCTTTTCATTTGAACATAAATATTTAGTTAATTTTCTGCCAGTGTATGAAAGTGATCTGTGAATTAATTATGTTGGGTATTAAAAGTTTTGTGACAAACAAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25282 True 5691 TUCP 0.43 2 179531 189439

Neighbor

gene id symbol gene type direction distance location
CI01000003_00157111_00159800 NA coding upstream 19287 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 165633 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 168564 7611 ~ 10967 (+)
CI01000003_00266342_00275005 NA coding downstream 76903 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 133428 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 165805 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 191055 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 201458 390622 ~ 408312 (+)
G22394 NA non-coding upstream 19071 137893 ~ 160460 (+)
G22396 NA non-coding upstream 32826 145858 ~ 146705 (+)
G22339 NA non-coding upstream 142913 33154 ~ 36618 (+)
G22337 NA non-coding upstream 151961 27263 ~ 27570 (+)
G22432 NA non-coding downstream 16930 206369 ~ 206686 (+)
G22433 NA non-coding downstream 17542 206981 ~ 207272 (+)
G22434 NA non-coding downstream 18144 207583 ~ 207922 (+)
G22435 NA non-coding downstream 22743 212182 ~ 213447 (+)
G22436 NA non-coding downstream 24830 214269 ~ 214693 (+)
G22578 NA other downstream 735364 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1673829 1862854 ~ 1868137 (+)
G23870 NA other downstream 2091221 2280660 ~ 2285641 (+)

Expression

G22420 Expression in PRJCA010000

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G22420 Expression in each Bioproject

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G22420 Expression in each Sample
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028247 zgc:165515 coding NC_007115.7 CM002888.2 72205923 ~ 72222067 (+)