G22435


Basic Information

Item Value
gene id G22435
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 212182 ~ 213447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25297
GGACAGGGTTCCTCAAATCTTGCCCTGGAGAGCTCTTGAAATGGGGACTTTTGGAGTTTAGCTCCAACCCTGATCAAACACACCTGAGCAAGCTAATCAAGGTCTTCAGGATCACTAGAAAATCACAGATAGGTGAGTTTGATCAGGGTTTGAACTAAAGTCTGCAGGGCAGTGGCCCTCCGGAACCAAATATGAGGAAAAATGCTTTAGGGGGTATGTTAAAACTTAATGGGCTCCCTACTTTACTTGCATCAGCATGACTGCCAATGGGCTCAACTCCTGCTGTACCTTTACCTGCTGGTGTTGGACCGTGTTACTTTAGAAAAACAAATGATTTATGCACTTTTTAATGTCACATTTTGTAGTACTGATGTAGAAACACTGATGCAGAAATATGTAAAGGTTATACTGCTGCAGAATTCTAGTAACAAGTTACCACTGCTGCAGAGATGTTCTACATCAGAAATGAATGTAATAACACAACACCTCCCCTTTAGAGATACAGTCAGATCTAACTATTGCAGTTGATCATACAAAACATGCAGAGCAGTGGGTCCTTAGTACCACTATTAAGAACCACTATTCTACAGCACTGGGTTTTAGACGGTATTCATGGTGGGGCAAGCAGAGAAGGGAGGGCTGGGGGGTTTCATGTCCTCTTGTAGGGGTACACGCTGGTTTCTGACACTGCAAAAGCTGAGTGGGTGGATCGGGTGGATCACATGGCTCTGACACAAAAAGCCTCTTGCCTCTTGCAGCATTAAAGATTCACTCTGCTTTGGAAGTGTGCTCTTTCATCCTCTTCCAAATTTAATGTGGGACTAAGAATTCACTTCCAGCCATCTCCTTGCAACAACATGGGCTTAATACAATGCTATTCAAGTATAGACAGCACTTTAATGTGCTCCATTTTATTGGTACTTTGTCTAAATTACCAATTCCTCAAATACCATGGATGGAGAATCAGGTAACAAAATTAGAAGATGGGATAGATAAGACTTGTGTAATATAAATTACCATAAATTACTGCTTAATGTAATGGAAGCAAGTCATGGATGAGAAGATTTACAACGGTATTGTTGTCACATATATTATTTACAAGTACCTCTATTTCAGAGGTCTGAACGAATGACACACAACATTTTGTTTTCATTAATCTCTGACACAAAAGCAGCTCTTGAGACAGAATGGTATATGACATTTGTCACAATACCTGCCGTTTTATATTACCTCAGGAAAGGATGAGCTCCTCATGTGCAATTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25297 True 1266 lncRNA 0.51 1 212182 213447
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00157111_00159800 NA coding upstream 51938 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 198284 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 201215 7611 ~ 10967 (+)
CI01000003_00266342_00275005 NA coding downstream 52895 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 109420 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 141797 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 167047 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 177450 390622 ~ 408312 (+)
G22434 NA non-coding upstream 4260 207583 ~ 207922 (+)
G22433 NA non-coding upstream 4910 206981 ~ 207272 (+)
G22432 NA non-coding upstream 5496 206369 ~ 206686 (+)
G22394 NA non-coding upstream 51722 137893 ~ 160460 (+)
G22396 NA non-coding upstream 65477 145858 ~ 146705 (+)
G22436 NA non-coding downstream 822 214269 ~ 214693 (+)
G22437 NA non-coding downstream 3165 216612 ~ 218340 (+)
G22438 NA non-coding downstream 6200 219647 ~ 219859 (+)
G22441 NA non-coding downstream 8566 222013 ~ 222783 (+)
G22447 NA non-coding downstream 13683 227130 ~ 229997 (+)
G22420 NA other upstream 22743 179531 ~ 189439 (+)
G22578 NA other downstream 711356 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1649821 1862854 ~ 1868137 (+)
G23870 NA other downstream 2067213 2280660 ~ 2285641 (+)

Expression

G22435 Expression in PRJCA010000

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G22435 Expression in each Bioproject

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G22435 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network