G22439


Basic Information

Item Value
gene id G22439
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 241789 ~ 243643 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25307
AACCGGTGATTCATTTTTTACAGTGTATTATTTCTACATGCAAAAACTAGCCGCTAACACTAACTTCATCCAAGATTAGGTTAAGGCTAATACACAGACATGAATTTAGCAATATATTGGATATTAAGTTTACAAAACAAATCTACAAACTTGTAAAGTTACAAACATTTTTTAATTGCAGGCTGAACTGGATGCTGAATACTAAAGAGTGAGCCTCAACACTTCTAGTGACTTGAAGTGCAAGTTGTGTGATGTCTCCTCAGATAACAGGACACGGACTAGTCTTTCTCTTTTCCAAATCCATTGTTGGTTATATACTTGTGTGTGTTTTGTGATTTTCTAGGTTTGTGCTGAGTTTCACTGTATCAAAGAAAGAAATACACACCAGCAAGATCTCAGAGATAATGCGTGACTTTGAATGTTTATGATCTTCCGATGAGTTCAGATTCGTCCACACTAACTACCTCCATCACTGTCTTCAGTGTCTTCAGTTATTTTAATAAAGTTGGCTTGCTTGTTTAACATGTTAATTTTCGTGTTTACATGTCAACAGGAAACAAGCTCTTTGTGCTCTCCCAGTGTACATGTGTGGACGACCCACAGTTCTTCAAGACCTGAAATGAAGAGTTGGCCGAGCCAGACATCACTGACATCAACTGACACAAACATCACTCCTGTTGATTCTGTCATCATGGACAATGAAACCACTAAGTCTTGCAAGCACTGCAGTTGTGATGGAAGATGATCTTCCAGTGTGTTTGACATGTTGAGAAATACACAGTCACAAGGTTTTTAAAAAAGGTTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25307 True 808 lncRNA 0.24 2 241789 243643
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00157111_00159800 NA coding upstream 81545 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 227891 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 230822 7611 ~ 10967 (+)
CI01000003_00266342_00275005 NA coding downstream 22699 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 79224 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 111601 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 136851 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 147254 390622 ~ 408312 (+)
G22447 NA non-coding upstream 11792 227130 ~ 229997 (+)
G22441 NA non-coding upstream 19006 222013 ~ 222783 (+)
G22438 NA non-coding upstream 21930 219647 ~ 219859 (+)
G22437 NA non-coding upstream 23449 216612 ~ 218340 (+)
G22436 NA non-coding upstream 27096 214269 ~ 214693 (+)
G22425 NA non-coding downstream 32414 276057 ~ 276995 (+)
G22421 NA non-coding downstream 46827 290470 ~ 290704 (+)
G22422 NA non-coding downstream 47459 291102 ~ 291765 (+)
G22468 NA non-coding downstream 52412 296055 ~ 296973 (+)
G22420 NA other upstream 52350 179531 ~ 189439 (+)
G22578 NA other downstream 681160 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1619625 1862854 ~ 1868137 (+)
G23870 NA other downstream 2037017 2280660 ~ 2285641 (+)

Expression

G22439 Expression in PRJCA010000

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.75.
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G22439 Expression in each Bioproject

Bar chart with 34 bars.
G22439 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network