G178435 (dpysl5)


Basic Information

Item Value
gene id G178435
gene name dpysl5
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 194699 ~ 233283 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU264717
atatatttttaTTGTTTCAGggatcatttattcatatatttttgcacTTATCCATCTGATTAATAACAAACAAGCCTTCACTTTCAGCTCCGACTGTGAAGAACAAATCACAAACACTGACACAAACCTTATAAACCGCTTCACAAAGTGCTTTTTCTGAAAAGTAAAAAACCCAAACACCTAAACCATATAAACGCAGATCAGAAATGACGATTTAAAAAACAGCACCAATAAGAACAGCCCGGGGCCCGGGGCCAAACACACGAACAACACACACCTGACCTAAACCACACCTGAACCAGAGAAGCTTTAGACACTTCATCACATCAAAACTAACAACATACAGCTCTATGAATATGTCAAATATAGATATTTCACAGACACTTTGTTCATCactataaacacaaacacatcagtaTGTTCAGACAGGAAGCTGAGACTGTGCTGATCCCGgcgtgtttcttcatcagaagtgtgtctcagcaatggaagtgaatgggtgccgtcagaaaaacatcagaataatccacagcgctccggtccagAAGATAGACGACGAtctattattattgtgattctgacggcacccattcacagaaACAGACTCCTGATGTGGGATGAGCACAGCACTGTTTTGGCAAATTCGTGAACTATAAACAGTGATCTGGAGgagtgaattaaaaatgaaatttctccctcatgctatttttgtttctgccaaatgcattttaaagaattagccaaacagttgacggtacccattgacttccatagtatccCAGCTCACAGGAAGCATTCTGAGGACGTTCAAGTCTGTGTGAACTGTGTGTTCTGAGTTTGTCACGCCACTGAAAAATGAGTTTGAATACTAAAGGACATGCGAAGTGAATAAAACAAGATATCAAAATCGTAAAAAATAAGCCGTCCTCTCTGCTCTCGAACGCTGGGGGCGTGTCTCACGGCGCTGAAGCCACGCCCACCCACACTCTCAACCAATCAGTGTTTGACATACTGCGAGATTCAAAGCTCTTTTATTTTCACCGGTTTAGACCCGCCCAATAAATCCTGATCAcggaaaactgtaaaaaaaacgtCATAACTTCTCCATTAAGTATTATATAGTTCACAGTCTTTGAAACATGTTTCAGCGAAgcatttctaacatttataatgtgtttacaTCAATTCTCTGAACTGACTTCACACAGACTTGAATAGAATGTTCTCTGATCTGGTCTTTTGAGTTTGAGTTTGAGTTTTCTAACTTTTCGAACTTGCAGTTATGATTTTATAACATAGCAAAACGTCCCTGGACCATATTTTGTAATCTCTTCAAACACTATGGAAGCCAGTGAGAGTCTAATGACGGAGCAGAGGTTTTTTGGCACTTTGGATGCGGTCCAGGTCTTCGTTCACAGCGATGTTTAATACTCTCAAACACAGGAGGACGGGAAGGGGTCGCCGTGGAGACGGTTCTGCGGTTTCCACGGTTACCAGATGCCACTGGAACGCCCTCCAGGTGGAGCCAGAATCCTGGCCGAGGACCTCTTAGGAATGTGGTCGTCCACTTGAGCgcctgaataaaaacacaatcccACAATCCTCTTTTTCTCGTTTTCTTACATAtacgtgtgtttgtttttataaatataatatacagagtacacactcatatactGACTAAACCAAATCAAATGATCatttatcacaattaattgtttgacagcactaatttatttcaatttcagaaaaataaccAGAGATTTTACTGTATATGAGGTCTTTGATCTGAAATGTATTTGATCATATCTTTCCACCACTCTGCAGATTGATAAATAATACATGCTGTGCATTAAACGATGGAAACGCTTAATGTCTTTCTGAAAAATTAGACATGATGAAAAGTTTAAACTGAATATTTAGTAACATATTTAGCTTAAATAGCTCTTTTGCATTAAATGGGGTatttggacaattttttttccactccTTTGCAGACTTTTGATATGCATTAAACCTGATACATAAAATTATTGGaggaaaataatacaatattttaaataattgtaatttatataatattgctGTATAAATGTTCAAGTAATttgatatagaaatataaaataatatatttatcttgatacagatataaaaatatttattgaaatattatttcctACTATTACTAAAAGCAGTATGTGAAGTGAAGCTGAGAGACCTGACAGGCTGAAGCTGGACTCGTGCAGGTCCCGAACGCCCGTGTGTCTGGGGGCCGCCCGCATGGGAGCATCGGCCTCCGGAGCGGACGACTCCTTCCGGACGGAGTTGGTCACGGCGGCGACGTCTCCCGAGTACGGCGCTCGATCCACGCCGCGCAGCTTCTGAGTCTGAGCATCACCACACAAAAACTAATTGTGTTAATGTGTTACTTTTCCAAACTGGGCGGGGCttgctttttaatataaaaagtgattcttttacaaatataaaagacCTTTCATAACAAAACGGAAGTGAAAAgcctcaggctgaaggaaatGTAAATAACGAAGTATACACGCTGGAATAGAAgagttactttactagttacttaaaGTAATCCGATTACTTGTAACTCCCTACGTTACTGGTAACTTACATACAGCTTCGTGAGGCTCCCatacagaccttctctctctggACCATCTTCTTGTAGAGGACGTCAGGAAAGGCTCTCATGGGGTAGAAGCGTCCGGAGCCCTGAGGGCAGGTGAAGACGCCGTTCTCACACACCAGACGGCCGCGGCTGACGGTCACCAGCGGGACGCCGCGGCAGCGCTGACCCTCGTACAGGTTAAAGTCTCCTCCCTGAACCTGAGAGCTCCTCGAGATCGTCCTGCGGCG

Function

symbol description
dpysl5 Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to be involved in nervous system development and signal transduction. Predicted to be located in cytosol.

NR:

description
PREDICTED: dihydropyrimidinase-related protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264717 True 2883 lncRNA 0.41 2 194699 233283

Neighbor

gene id symbol gene type direction distance location
mrps10 NA coding upstream 15317 177463 ~ 179382 (+)
phtf2 phtf2 coding upstream 100818 82433 ~ 93881 (+)
ripply2 NA coding downstream 76915 310198 ~ 311201 (+)
LOC122333200 grik2,LOC107574533,LOC107081635,LOC106535628,LOC108233439,LOC103457461,LOC102223640 coding downstream 118796 352079 ~ 389366 (+)
naga naga,LOC103380792 coding downstream 157669 390952 ~ 396784 (+)
rerg rerg,LOC107669035,LOC107662225 coding downstream 199690 432973 ~ 448981 (+)
LOC122333209 timp3,LOC107569206,LOC107572594 coding downstream 235812 469095 ~ 479393 (+)
G178448 NA non-coding upstream 14150 134053 ~ 180549 (+)
G178469 lrp6,LOC107680820 non-coding upstream 62411 124958 ~ 132288 (+)
G178455 NA non-coding upstream 121477 72426 ~ 73222 (+)
G178449 ptpn12,LOC107729010,LOC107569955 non-coding upstream 123221 24063 ~ 71478 (+)
G178498 NA non-coding downstream 5794 239077 ~ 239863 (+)
G178437 dpysl5,dpysl5b non-coding downstream 6634 239917 ~ 240392 (+)
G178499 NA non-coding downstream 10134 243417 ~ 244921 (+)
G178450 NA non-coding downstream 11809 245092 ~ 245818 (+)
G178501 LOC107680816,LOC107569949,LOC107701362,LOC107570167,LOC107570168,LOC107738580 non-coding downstream 17035 250318 ~ 252182 (+)
dynlt1b dynlt1,LOC107680829,LOC107569954,LOC107729018 other upstream 41484 150451 ~ 153215 (+)
G178503 NA other downstream 31234 264517 ~ 266728 (+)
G178541 NA other downstream 217843 451126 ~ 456354 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other downstream 291028 524311 ~ 538878 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other downstream 542093 775376 ~ 778365 (+)
G178593 NA other downstream 603067 836350 ~ 838553 (+)

Expression


Co-expression Network