G178492


Basic Information

Item Value
gene id G178492
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 206070 ~ 207393 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU264802
ctgtaGTGACCCCTGACGACCCCGTCGGGGTTCAACATGGGGATGAGCTTGAAGACAAACATCCTGCGCAGCGTCTGAGCACGAGGGTCGTCCGGACTCAAGATGAAGTTCAGGAAAccgttaaaaacaaaactggaaGGTGTCTCTCCGGGATGAACACGACTGCTCAGAAAAAACACCTGAACACatgacagaacacacacacacacacatacagacacacacacacaaacacacagacacacacacacacacatacagacacacacacacatacagacacacacatacagacacacacacacacacacacacacacagagacatacagacatacagacacacacacacacacacacacacacacacagacacacacagacacacatacagacacacatacagacacacacagacacacacacagacacacacagacacacacacacacacacagacacacattagcTACTATACTGCAGCTTTTATATCACAATTTGATTTAAGTGTAATGACTCATGTTTGATTAGTATTTTAATTCCTAAGTTTGGCCTGATACCCGTTTGCCGCTGAAGCGGTGCGCTCGAGGCGTGCCGAGGTCCGGGAAGAGACGCTCCAGCCTCGGTTCTCTCTCCTCCAGCAGACCGTGACACGACGAGACCGTGATCAGATCCACCCGCTGACCGTCCAGAGAAGAACACAGCAGCTCACGGTGATAGTAGATGCTCTCCAGCGCACTGCTGACCAGACAAACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264802 True 756 lncRNA 0.50 2 206070 207393

Neighbor

gene id symbol gene type direction distance location
ost4 NA coding upstream 7956 197814 ~ 198114 (+)
mrps10 NA coding upstream 26688 177463 ~ 179382 (+)
phtf2 phtf2 coding upstream 112189 82433 ~ 93881 (+)
ripply2 NA coding downstream 102805 310198 ~ 311201 (+)
LOC122333200 grik2,LOC107574533,LOC107081635,LOC106535628,LOC108233439,LOC103457461,LOC102223640 coding downstream 144686 352079 ~ 389366 (+)
naga naga,LOC103380792 coding downstream 183559 390952 ~ 396784 (+)
rerg rerg,LOC107669035,LOC107662225 coding downstream 225580 432973 ~ 448981 (+)
LOC122333209 timp3,LOC107569206,LOC107572594 coding downstream 261702 469095 ~ 479393 (+)
G178448 NA non-coding upstream 25521 134053 ~ 180549 (+)
G178469 lrp6,LOC107680820 non-coding upstream 73782 124958 ~ 132288 (+)
G178455 NA non-coding upstream 132848 72426 ~ 73222 (+)
G178449 ptpn12,LOC107729010,LOC107569955 non-coding upstream 134592 24063 ~ 71478 (+)
G178488 NA non-coding downstream 948 208341 ~ 209171 (+)
G178430 tmem214 non-coding downstream 7283 214676 ~ 216450 (+)
G178434 NA non-coding downstream 15963 223356 ~ 312046 (+)
G178498 NA non-coding downstream 31684 239077 ~ 239863 (+)
G178437 dpysl5,dpysl5b non-coding downstream 32524 239917 ~ 240392 (+)
dynlt1b dynlt1,LOC107680829,LOC107569954,LOC107729018 other upstream 52855 150451 ~ 153215 (+)
G178503 NA other downstream 57124 264517 ~ 266728 (+)
G178541 NA other downstream 243733 451126 ~ 456354 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other downstream 316918 524311 ~ 538878 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other downstream 567983 775376 ~ 778365 (+)
G178593 NA other downstream 628957 836350 ~ 838553 (+)

Expression


Co-expression Network