G178498


Basic Information

Item Value
gene id G178498
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 239077 ~ 239863 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU264808
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagaagagcagtctcacacacacacacagcgcgtGATGCTGCAGATCCGAGTCGACGTGAGAGGAATATTAACGTGTGTGTGACCGAGACGCACAAAAGACTCTGGAGCCCTTCTTTCTGTTTGTCCTCCTGCTCTAGACTCTTCTCAGAACACCGTCATATATAGAGTTACCGTTGTCGGGGGAAAAGTATCTTGAAGTTATGTGTAGAATGTATAGAACTGTGTAATAGATTCTCGTAAGAGAGATGTGTTCAATCCCTGGCGGACCGGGCCTCGAACCCACGACCTTTGACCCTCCGTCATCTTCTCACTCTTAACCTGCTCTGCATCTCGTGGATCTTCCCGTCGCTGCTCTTTCATGTAGAGAACTGCtcttattttctatataatgacgtatttaaaaattaatgaccAAATAGATGTTTATAAAAGTTCATGTTGAAAGTTCACAAATGAAATTTAACCAGGTTGATGTTAATTATTGCTAACTCAAACCCCCTTTTTGTATACCTCTctaccactgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264808 True 621 lncRNA 0.44 2 239077 239863

Neighbor

gene id symbol gene type direction distance location
ost4 NA coding upstream 40963 197814 ~ 198114 (+)
mrps10 NA coding upstream 59695 177463 ~ 179382 (+)
phtf2 phtf2 coding upstream 145196 82433 ~ 93881 (+)
ripply2 NA coding downstream 70335 310198 ~ 311201 (+)
LOC122333200 grik2,LOC107574533,LOC107081635,LOC106535628,LOC108233439,LOC103457461,LOC102223640 coding downstream 112216 352079 ~ 389366 (+)
naga naga,LOC103380792 coding downstream 151089 390952 ~ 396784 (+)
rerg rerg,LOC107669035,LOC107662225 coding downstream 193110 432973 ~ 448981 (+)
LOC122333209 timp3,LOC107569206,LOC107572594 coding downstream 229232 469095 ~ 479393 (+)
G178435 dpysl5 non-coding upstream 5794 194699 ~ 233283 (+)
G178430 tmem214 non-coding upstream 22627 214676 ~ 216450 (+)
G178488 NA non-coding upstream 29906 208341 ~ 209171 (+)
G178492 NA non-coding upstream 31684 206070 ~ 207393 (+)
G178448 NA non-coding upstream 58528 134053 ~ 180549 (+)
G178437 dpysl5,dpysl5b non-coding downstream 54 239917 ~ 240392 (+)
G178499 NA non-coding downstream 3554 243417 ~ 244921 (+)
G178450 NA non-coding downstream 5229 245092 ~ 245818 (+)
G178501 LOC107680816,LOC107569949,LOC107701362,LOC107570167,LOC107570168,LOC107738580 non-coding downstream 10455 250318 ~ 252182 (+)
G178537 NA non-coding downstream 166648 406511 ~ 409812 (+)
cunh11orf98 lrp6,tmem214,LOC107569942,LOC107680820,LOC107701357,LOC107570162 other upstream 24802 100804 ~ 214275 (+)
G178503 NA other downstream 24654 264517 ~ 266728 (+)
G178541 NA other downstream 211263 451126 ~ 456354 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other downstream 284448 524311 ~ 538878 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other downstream 535513 775376 ~ 778365 (+)
G178593 NA other downstream 596487 836350 ~ 838553 (+)

Expression


Co-expression Network