LOC122333249 (slc16a7,zgc:165507,LOC107698009,LOC107662218,LOC107568725)


Basic Information

Item Value
gene id LOC122333249
gene name slc16a7,zgc:165507,LOC107698009,LOC107662218,LOC107568725
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 553127 ~ 558473 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU264904
ACATACAAACCAGTAACATTGCTTTTAACAAACACTTcaggtgacctttgacccctgaTGCCTATATTTTATAGCAAACACAATCTGTTGACTGTGTTCTTTAGGCTAGTGTGTCGCTATGAATCGATCACAGATCTGATGATTTCATCATAACAGTGTGTTATAACTCTGTTTTAACCCTCTGGTCATTCAGTCACACTGAAAGGTAAAtgctcttttttcattttttaaatcttctaTTTTTATCACAGCGGTATGAAACCTTTGTGGCACTTGCTCTatgaacacaaacacgcatacaTTTTAATCTCAACGCCAACAAAATTCTTGCAGTTCGGTCATGAAGTCTGCTAATCTAAATGCAAAACCTGTTCAAACACACAATAGCTACTATGATtcgctttatttataaataatggcgttttgtaatatttgtgctgctttaattatttgttaGACGTAAGTGCCGCACTATCCCCTTAAAATACAACATACTAATGGAATAAAATCTTTATTAGTTTGATGTGGTTGAGAGAATGAGAGACAAGTCGGTGTGATTTACATCCTTTCACTTGTGTTACAGATCTCGAGGCGTCTTCCTAACGTTGTGgtttaattgtaaaatgtcattgcatCCAGGATTACGACCCAAAGAAGTGAACACACAATGATTCATCAGCAGCGGCGTGACGCTAAAGATCAAGTTAAACGCCGTACATTTGCTGAACgtgacaaatacaaaaaaaagcaaacaatatGGCCgctaataataatcataacagCATGTGTGTGAATCAAGAGTGTGTTTTTAGTGGCAGTTTGCTTCAGCATCTCCTGACAAACATGAcctcaaatgttaaaaaaaaatgatacaaaacataaccatcacattaaataaaatcattagtGTTGTTAGTTATTTACATGCTATAACTAGCACAACATCTTCATTCCAGTGTTATAATGCTTCTGTTCTACAGGAAAGATCATCATTTAATGACAGGAATAGCTCTGGTGCtcttaaaaacatgaatgaacgtgtgtgtgtgtatgcgttcATACTCAACACGGGCTTCGAGGAAAAGAGACGCTAACGCAGCACTACaagatataaaacaaaaccatcCTAGAAGTAGAATTTAAGATGCATTTCTATGGAAGCCTGCTTGCGTCAcggaataaaaacataaaaaaatgtcattttgactttttatctcacaattttgacttgAATTAAGAGACAACTTCATGTATGAGATCAACTCAAGATGCACTCTCTTCATATGAATGTAAACAGTGATATTTAAACTCAGAACTGAGATATAAACTTGGCTTGCTAGATTAAACTCAAAATGATGATGTTTTACGAGAGATTTAAGCTCAGAGTCACGATGCAAACtctttgtgaaatataaacctAAATCACGAGATGGTTATATCTCAGATTTGAGGCAGAAGCACAGTTTAATTGGGTAACTTTATTTTGACGGTCCCTTTTGAGCGTTGTGTTGAGAATAATAGCGCTTCCTTACAGTCAGctgtcattagagtattaatagAGTGATTCATGTCTGTGACAGTCtcccaaaaaacatttactgactACAAGTAACTTCACAAGTAGATCTCCCGAACCTCCAAGGagttaaagggaccatcaaaataaagtgaaaccttTCATTTGAATCATGAGATTAAAGCTCATTTTTAACGCTCTTTATCACTCTGTATTCTACGTTTATACGTCGtaactgtaaaagaaaagtCTAAATAGTAAGATAAAAAGtttagtcatttattcattttttaatttagtgctgGAAACGGGCCACATACAGTGTGTCTGATAGATGGTTTAGCCTCTGTCCAACCGATTAGTAAATGTACATCagcaaatacattaaatatagcaTTATATACACAGTTAGGATAGTAGATGCTAACGTTATGTTTAAGGCAATACGTCATGAGTAGGAGAGCGTCGATCGCTCAGGAGTCACGTCAAACTCAAATAccctgtgtaaaaaaataacccCGATAACGGAACTAAGGGAGCGCTTGCCCTGAGGACGTCTGCTGGAAATCATATTGCTCGAAGCGTTAGATTTGGTAATGATCCTCAGAAGTCATTTTGGTCAGGAACGGATTCGTAAGGCCCGAAAACATCAGAAACACACGCGGGTTTACATTCAGATCCGTCAGATAGCAGGCGCCGGCAGCGTAACGTGTGAAACACACTCGAATGAGCTGGACGTCTGCCGTTTGGCTGCAAGATACGGATGCTTGCTGAACCTGAGCCACGAGACATGACCGAAACCAAGCTATAAAGGCCGTCTATATATCAAAGTGCGCGTTTATTAGGGCTGCGAAGATAAATCCGTGCAGGATCGATCGTGGATGGATTCCCGATTAATAGCAAAAACtcaaaattatgagatatataCTCAACACGTGAGATTTAAACTAAGAATTACAATATAACTTTAGAATTAGACTATTAGACAAACTTAATTATGAGACATAAACTCGAAATGTGAGATTTAAACTCAAACTTCAAATGATGATATGAACTCAGAATTAAGATATTAACTATATTAGAACGGTGAGGTTTAAAAGCACAGTTTAGAGAGTAATTTTGATTTTGACCTTTCCCTCCTCTGACTTCCAAGTTTatatcttgtaaaaaaaaaaagaaaagtggtgTTTTGCGGTGGAAAGGAAATCTCCGAATCAATGCGGAACGATTTATTTTCCCAGCCCAGCGTTGATCTCTAGAGTTCTGCTGTGGTCTACTCAAGCCTCTACAGCTTTGGCAGTGTTCAGGGTTTGCATAGGTGCTCAGATGTTGGTTTCTCGCTGCATGACGCCGTCTTTGTTATCACAGAGCTGCTGCGCTGCTTCGGCGTCGGCGTCGGCGTCCGCGTGGGTCTCCGTCTGCTCCTCGCGCTCGGCCCGCTTGTACGTCTCCTCCTGTTTGCGCTCGCGATCCAGCAGCCGATAGTTGATGAAGTTCCCGATGAAGAGCCAGATGCTGGAGAGGACGACCACCGCCCCGCAGCACAGCGGCGGGCCGATGAGCACCGGGCAGCACTCCACGATGGTGGTGAGCCCCACGGCGCTGGAGAAGCGCTGCGCTCCGACCAGGTCCATCAGCGTCTCGAACAGGACGGCGCTCACCATCCCGAAGGCGAAGCCGAAGAAGACGGCGTACACCACCATCCCGCTGTAGCTCTCGGCCAGCGGACACAGCAGGTGACACACGCCGTTATACAGCACGGCGAAGCTGAAGAAGTACTGGATGCGCGGCCGGACCCAGCGAGAGTTGGCCAGCAGGCCCATGGACGGCCGAGCGAACATGTCCACGAACGCCAGGATGGACAGCAGGAAGGCCGCCTGGTACTCGTCCACGCCGTTGTCTTTGGCGTACGACGAGAGGAAGACGATGGGCGCGAAGAAGCCCAGGAACATGATGACGTTTCCCGACAGATAGATGAGGAACCCGCGGTGCTTGAAGAGCGACAGATCCAGGAACTTATTGACCGTCTGCCAGGCCGTGC
>XR_006248600.1
cgcttttattttgaagcgGAAGCGCGCCTCCTGCTGTTCAGTGACGGAACACACACTTCCGCTCAACGCTGAACACATTCCGAGCTAAATATAGCTAATATAGCTGGAGCTGAAGTAACTTTAGTTCTCTGTTTGCTGAACTGTTGTGTAAAAGCAGCCAGCGGTCGTGTATCTGAACCGAATCGTGTGTCAGTCTGAATGTCACTGAATCACTCGTGTTCGGTCAGATTTCTGTTCATTCGTTGAAAAACAATTCCTGTCTGCCTTCAATATTCAGTGTAATCCAATCATATTCTACTTAACCAAATTTGTtctgcataaatgtaaatatgggGAAACACGGACAGAAAAGTTCAGTAATGGACAGAAGTTCAGTAATGcctaaaaagcttaaaaaaCAGGTGGAGACAAATCCCTGTCAGTGAGCGAGTCatttgaatcattgactcaacTGATTCGTTTAAACGGGAACGAAGCACCTGCGCGAAAACGGACTAACTGTAAGTTATATGAGCGCAAAACGcacttctccttcttcttcttttaactGAAGATTGTGTAAAAGCAATATCACACTGGCAGTCACGAATGTAATGAATCGTGTAAGTGAATCAACTCCGCTGCTTTACTGAATTCTGTGCTGGAGCATTCAACAAGATAAAGAGAGATACTGAACTGAAATTCATTGCAACTGTGATGCATTCATTATATTCATAACAGTACAGCACATAGACAGAAACATTCACCATGAACGTACACACGAGAACATACAAACCAGTAACATTGCTTTTAACAAACACTTcaggtgacctttgacccctgaTGCCTATATTTTATAGCAAACACAATCTGTTGACTGTGTTCTTTAGGCTAGTGTGTCGCTATGAATCGATCACAGATCTGATGATTTCATCATAACAGTGTGTTATAACTCTGTTTTAACCCTCTGGTCATTCAGTCACACTGAAAGGTAAAtgctcttttttcattttttaaatcttctaTTTTTATCACAGCGGTATGAAACCTTTGTGGCACTTGCTCTatgaacacaaacacgcatacaTTTTAATCTCAACGCCAACAAAATTCTTGCAGTTCGGTCATGAAGTCTGCTAATCTAAATGCAAAACCTGTTCAAACACACAATAGCTACTATGATtcgctttatttataaataatggcgttttgtaatatttgtgctgctttaattatttgttaGACGTAAGTGCCGCACTATCCCCTTAAAATACAACATACTAATGGAATAAAATCTTTATTAGTTTGATGTGGTTGAGAGAATGAGAGACAAGTCGGTGTGATTTACATCCTTTCACTTGTGTTACAGATCTCGAGGCGTCTTCCTAACGTTGTGgtttaattgtaaaatgtcattgcatCCAGGATTACGACCCAAAGAAGTGAACACACAATGATTCATCAGCAGCGGCGTGACGCTAAAGATCAAGTTAAACGCCGTACATTTGCTGAACgtgacaaatacaaaaaaaagcaaacaatatGGCCgctaataa

Function

symbol description
slc16a7 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; gill; and heart.
zgc:165507 Predicted to enable monocarboxylic acid transmembrane transporter activity and symporter activity. Predicted to act upstream of or within pyruvate transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Orthologous to human SLC16A7 (solute carrier family 16 member 7).

NR:

description
PREDICTED: monocarboxylate transporter 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264904 True 3557 lncRNA 0.42 2 554014 558473
XR_006248600.1 False 1535 lncRNA 0.39 2 553127 554783

Neighbor

gene id symbol gene type direction distance location
etv6 etv6,LOC107698007 coding upstream 30587 507402 ~ 522540 (+)
LOC122333209 timp3,LOC107569206,LOC107572594 coding upstream 73734 469095 ~ 479393 (+)
rerg rerg,LOC107669035,LOC107662225 coding upstream 104146 432973 ~ 448981 (+)
naga naga,LOC103380792 coding upstream 156343 390952 ~ 396784 (+)
LOC122333200 grik2,LOC107574533,LOC107081635,LOC106535628,LOC108233439,LOC103457461,LOC102223640 coding upstream 163761 352079 ~ 389366 (+)
lrig3 lrig3,LOC107710079,LOC107707969,LOC104942525 coding downstream 21319 579792 ~ 599671 (+)
echdc3 echdc3 coding downstream 54869 613342 ~ 616781 (+)
rtcb rtcb coding downstream 64964 623437 ~ 631571 (+)
trnam-cau_120 NA coding downstream 241461 799934 ~ 800005 (+)
eps8a LOC107561250,LOC107568712,LOC107707945 coding downstream 243072 801545 ~ 835314 (+)
G178557 LOC107662220 non-coding upstream 47590 503211 ~ 505537 (+)
G178550 NA non-coding upstream 95447 447009 ~ 457680 (+)
G178549 NA non-coding upstream 120791 430013 ~ 432336 (+)
G178537 NA non-coding upstream 143315 406511 ~ 409812 (+)
G178501 LOC107680816,LOC107569949,LOC107701362,LOC107570167,LOC107570168,LOC107738580 non-coding upstream 300945 250318 ~ 252182 (+)
G178577 NA non-coding downstream 79205 637678 ~ 638126 (+)
G178589 LOC106593275 non-coding downstream 128965 687438 ~ 783476 (+)
G178592 LOC107707972,LOC107561230,LOC107658995,LOC107710075,LOC107662214,LOC107568726 non-coding downstream 205085 763558 ~ 769697 (+)
G178617 NA non-coding downstream 240069 798542 ~ 799412 (+)
G178619 NA non-coding downstream 284363 842836 ~ 843975 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other upstream 14249 524311 ~ 538878 (+)
G178541 NA other upstream 96773 451126 ~ 456354 (+)
G178503 NA other upstream 286399 264517 ~ 266728 (+)
cunh11orf98 lrp6,tmem214,LOC107569942,LOC107680820,LOC107701357,LOC107570162 other upstream 338852 100804 ~ 214275 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other downstream 216903 775376 ~ 778365 (+)
G178593 NA other downstream 277877 836350 ~ 838553 (+)

Expression


Co-expression Network