G178627


Basic Information

Item Value
gene id G178627
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 867454 ~ 868576 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265015
tctcacacacacacacacacacacacacacacagtctctctctctctcacacacactctctctctctctctctcacacacacacagtatagaGAGTGTTTTACCGAGCTTGACGAGGAACTCTCTCTCCAGCTGTGTGACCTGAGCACAGGCCTCATCCAGAGACGAGCACAGCTTCATTTTGGGCCGCAGCAGCTCCAGCGTGTCTGTGATCATGTACTCGATGTCGATGGGGAACGGCTGCTCTTTAGTCCACACATCCAGACTCTTCTTCCACCAGACGTACCTCTGAAACACACGCAAACAGACAGACCTTCACTGCGCTGGACATATTATCTGCAGACTGGAATAATTACTCTTAAGTCTCacgtctgcatttatttgatgtgaaaatgtgcaataatattaatacctaaaaaaaatatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265015 True 427 lncRNA 0.46 2 867454 868576

Neighbor

gene id symbol gene type direction distance location
LOC122333262 NA coding upstream 7711 851301 ~ 859743 (+)
atp23 atp23,xrcc6bp1,LOC106576246,LOC106609469 coding upstream 19532 844355 ~ 847922 (+)
eps8a LOC107561250,LOC107568712,LOC107707945 coding upstream 32140 801545 ~ 835314 (+)
trnam-cau_120 NA coding upstream 67449 799934 ~ 800005 (+)
rtcb rtcb coding upstream 235883 623437 ~ 631571 (+)
LOC122333207 NA coding downstream 62665 931241 ~ 932864 (+)
chrm2a chrm2a,LOC107561244,LOC107658987,LOC107707993,LOC107568718,LOC107662193,LOC108427087 coding downstream 98477 967053 ~ 1037182 (+)
LOC122333216 NA coding downstream 214818 1083394 ~ 1086227 (+)
LOC122333217 LOC107707997 coding downstream 218196 1086772 ~ 1089265 (+)
slc38a4 slc38a4,LOC107658982,LOC107662190,LOC107707107,LOC107555871,LOC107590506,LOC108411501 coding downstream 246156 1114732 ~ 1139102 (+)
G178619 NA non-coding upstream 23479 842836 ~ 843975 (+)
G178617 NA non-coding upstream 68042 798542 ~ 799412 (+)
G178589 LOC106593275 non-coding upstream 83978 687438 ~ 783476 (+)
G178592 LOC107707972,LOC107561230,LOC107658995,LOC107710075,LOC107662214,LOC107568726 non-coding upstream 97757 763558 ~ 769697 (+)
G178577 NA non-coding upstream 229328 637678 ~ 638126 (+)
G178633 NA non-coding downstream 50213 918789 ~ 923825 (+)
G178639 NA non-coding downstream 77531 946107 ~ 948907 (+)
G178590 NA non-coding downstream 132982 1001558 ~ 1070895 (+)
G178664 NA non-coding downstream 273718 1142294 ~ 1142530 (+)
G178666 NA non-coding downstream 282700 1151276 ~ 1151551 (+)
G178593 NA other upstream 28901 836350 ~ 838553 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other upstream 89089 775376 ~ 778365 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other upstream 328576 524311 ~ 538878 (+)
G178541 NA other upstream 411100 451126 ~ 456354 (+)
G178503 NA other upstream 600726 264517 ~ 266728 (+)

Expression


Co-expression Network