G178639


Basic Information

Item Value
gene id G178639
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 946107 ~ 948907 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265027
TAATTTGTCAGGGTTTGCAGCATCAGCAGGTTTTGACAGACGTCACGTCTCTGTCCTCGCTGTGATTGGCCGTGACGCTTCTCGCCGCTCAGCTCCGCTCTGCTGTCAATCACGTGGGGAAAGCTGGGAGCTGATTGGCTGAGGGGTTCTGGCGGTCATGTGACGCGCTGGGAGATCAGGTACAGATGAACGTTTGACCCTGCACATGAATATCTCAAAGCAGAAAATACGgtcaaaaaaaatctatgaaacgtgaaattttgaagtagacaaaatttttttgtaaaacataaaccaaaaaaaagcctaaaactttatttattgctattataacttcttttttttttttacggcgTACACACGGAGCATTCATTAAcgtttattaaatcattaaaaaaaaaaaaaaactcaattgaTTTAGTTACAAAACAAcatgtcaaaaatcatttaaaacaattaacaattatacatttatttatggaataaatatataaatgtaactgaaaaataacatatgcAAAATacgtaataataaaattaactgtaaataatctattttgaataaaccttttttaagaCTTAAATAGTATTTCAATAATCCGTTTCATgcattaaattacacatttattaatgttattaatttagCTACAAAATGCCAcgccaaaaataatttaaataagaaataaaaaataatatacaacatTAAAAGGAATATTAAACCATTAGTACATTATAAAGCTTTCCGATCCTTAAGACTGAAGTCACCTTTTCTTgtaaaattcagtaaaaaaaccTCCATTTACAACTTTTtgatatattatacaatttttggcattgattttaatatgataatattatttcatgaaCTCAAGCTAAAATGAACAatgaagtgtatttttaaatcattttaacaagAAAGCAACTGAGCGGCTCGTTGTTCCTCCATTAATTACAAATTGGATTGAATTGCAATTTCTTTCCTgtaaagaacaaacaaacatctgaCAGTAAAGAACAGCTTTGGGGTTCGACTTCATGCACCATTACTGGTTACTTCTGAGAAGCTGTTTTGAAGCACCTGTACTGAATAACCCactataaaactaataatacatTAACATACGCACTATCCATAAAACACCAACTGCTTATTTCCTCAGAAAAGCGAAGGAGAACGTCGGTCTCGGGAAAGActttaaatggcaataaaacCCAGAAGGGACGTTCAAGAAGTCATTTGCGCTTTATGGTGgaatttaattagcattaatgcTCAGAAATGTAAGTGAATCATCGCCGATGTACAGATGAAACATTAACACGTTATTCATTTACAGTTTAGACTTGGAGatgaaaccaaaccaaacctgctatatatatatataatgaatgtaattagcaatgaATAAACCTGTAGATGAATGAGATGAGAGCGATATTCGGTGATAATTCTGTTTCTGTTATATTTGCGTGTGTTGAAATGTCTGTAGAACTGGACTTCTATGAATAGCAATGACTCTGTGAGGAACAGATGAAGAGAAACTCTCCTTTAAAAGAAGGAGCATCTGAAGGAAGCCTCATATACAGTGATATTAAAACAGCATCCTGCACCCCTCTGCTGATTATATCGATCACTTCATACGTCATCCATTTCATACAAATTGACGTAAAacgtaaataaaatgaaattaaataaacgaATGCCTTTCTTACGTTCTTAACAAGTATATTATGATGGTTTAATGTGCTATAtaacatttgcattattatgtaaatgagtGCATGTTTATGCGTAAtacttattaattatttataactaTAACTGATCAATTCGTCTTTTTGTACTCTATAATAAACACTAGCTATGAAGATAAACAAACAACCTTTTCAAAAACTAATATACTCTTAATTCTTTAGCCTGCTTAATGTActtaatgtaaatacacaaatgattatttaaccgatgaattatttaataatttaattattattctaatttataattaacattatttataacatctattattattttcataatttttcacattttttttaaatgcaaaaaacaactAACGTAATGAACTGATCATTAATtcataaactcttttttttttttttttttaaagatgtgctACTCCTAGTTCTTCGTAATAAACACAGGCTAAAGCCATTTCTGTGTAAATTACTGAGCTGAACCCAAAATCTTTCTACGTAAGAACTTAACACAgacaatatttcacaaatgtgtCCAGATCTGTGACATTCGTGTCagatattcattaaaataattgcacataTGAATATGTAAGTCAGACAATGATTATTGCAAAGTGCACCCTGTCAGGGCGATCAGGACGGATGATTTATTCTCTGGTAATGACTGCCTGACGCCGCCGCATTACACGCATTACACCGCAACTTACtacataaatcaataaatgtacaTGAAATATTGATCTGAGCGTAAACGATGATGTTGCATGAGAAGAAAGACCAGTAGCGCCACGCAGCGATCGATCAAGCAGCGTGACGGCGTTATGCACACGGAGCGAGGCGGCCGGCCAATCAGAAGAAAGGATGATAGAGACGTGAgtcataaacataaatatgagtctctctctcgctgGCTTTATTCACCCGCAGGGAACCAGCGACATTACAGAGCTCTCCtcgcagaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265027 True 2776 lncRNA 0.33 2 946107 948907

Neighbor

gene id symbol gene type direction distance location
LOC122333207 NA coding upstream 13243 931241 ~ 932864 (+)
LOC122333262 NA coding upstream 86364 851301 ~ 859743 (+)
atp23 atp23,xrcc6bp1,LOC106576246,LOC106609469 coding upstream 98185 844355 ~ 847922 (+)
eps8a LOC107561250,LOC107568712,LOC107707945 coding upstream 110793 801545 ~ 835314 (+)
trnam-cau_120 NA coding upstream 146102 799934 ~ 800005 (+)
chrm2a chrm2a,LOC107561244,LOC107658987,LOC107707993,LOC107568718,LOC107662193,LOC108427087 coding downstream 18146 967053 ~ 1037182 (+)
LOC122333216 NA coding downstream 134487 1083394 ~ 1086227 (+)
LOC122333217 LOC107707997 coding downstream 137865 1086772 ~ 1089265 (+)
slc38a4 slc38a4,LOC107658982,LOC107662190,LOC107707107,LOC107555871,LOC107590506,LOC108411501 coding downstream 165825 1114732 ~ 1139102 (+)
slc38a2 LOC107707990,LOC107658981,LOC107662192,LOC107590504 coding downstream 206557 1155464 ~ 1165727 (+)
G178633 NA non-coding upstream 22282 918789 ~ 923825 (+)
G178621 NA non-coding upstream 35512 845425 ~ 910595 (+)
G178627 NA non-coding upstream 77531 867454 ~ 868576 (+)
G178619 NA non-coding upstream 102132 842836 ~ 843975 (+)
G178617 NA non-coding upstream 146695 798542 ~ 799412 (+)
G178590 NA non-coding downstream 52651 1001558 ~ 1070895 (+)
G178664 NA non-coding downstream 193387 1142294 ~ 1142530 (+)
G178666 NA non-coding downstream 202369 1151276 ~ 1151551 (+)
G178670 NA non-coding downstream 231787 1180694 ~ 1182218 (+)
G178699 NA non-coding downstream 297265 1246172 ~ 1247077 (+)
G178593 NA other upstream 107554 836350 ~ 838553 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other upstream 167742 775376 ~ 778365 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other upstream 407229 524311 ~ 538878 (+)
G178541 NA other upstream 489753 451126 ~ 456354 (+)
G178503 NA other upstream 679379 264517 ~ 266728 (+)

Expression


Co-expression Network