G178709 (dpysl5,dpysl5b)


Basic Information

Item Value
gene id G178709
gene name dpysl5,dpysl5b
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 223349 ~ 235752 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265131
gtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcatgaTCTGTTCTTCACCGCAGGCTCACTGTCCAGTGTACTTGGTGAATGTCTCTAGCGTGTCTGCTGCTGATGTCATCGCTGCTGCTCGGATGCAGGGTAAAGTGGTTCACGCCGAGACCACGCTGGCTCATTCTGCGCTGAGCGGCATGCATTACTATCATCAGGACTGGGCTCATGCCGCCGCCCACGTCATAGCCCCGCCCCTCCGGCTCGACCCCAGCACCCCCGACTCCCTCATGGGCCTGCTGGGCAAGTACGCACCCGCCAATCATCTCAGAGCCCCGCCCCTCCGCTTTTAGAACGCAGACTTACTTTAAGAAGTGATGCGTTACGTGATGTGTGACTCACTACAAACGTAActaaatatgtactttttattaaaaagtattttttaaatctagctTGTTTCTTATACAAACGCAAAAGTGAAATGATTAGCCTGtctctgatctgtgtgtgatgatgatgatgatgatgatgatgatgatgatggtgatggagtgacactctctcacacacacactgatgtagTGACACACACAGCCAAGGTGAACATATTTCTTTGATTTGCATCATCTTTAGACTTCAGAGCGGACACAGGACAGTAAAGAAAGCCTTCGTGTGTGTGTAAGACATAGTGCAGACGtgagagttttatttatttatgaaggaAACTGTCAAAAGGCATAAATACAAACTTATAAATTCTTATGAAAAAGAACAGGCTTGGCCGTTACTAACAGTTAACCGACTGATGacacaaaaacagttttctagctgctatattttaatttaacatttcattctcagtcttttttatttaattgacgGGTCGGTTTTGATTGGCGGGCCTGTGTCATTAACCCTTTCCCCTCTCATCTGCTGTCACGGCAACCGTTTGCAAACATGCATCCATTTGGAGTTTtactatgtaaaataaaaatgtgtgcgGGGAATGAAGCACATGTGTTTGCTGCTTTATTCACATTATGAAGACATCAGACactaataaacaatataatatataatcatatcaCGTGATGGCGTTTTATGA

Function

symbol description
dpysl5b Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to act upstream of or within axon guidance. Predicted to be located in cytoplasm. Is expressed in central nervous system and trigeminal ganglion. Orthologous to human DPYSL5 (dihydropyrimidinase like 5).
dpysl5 Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to be involved in nervous system development and signal transduction. Predicted to be located in cytosol.

NR:

description
PREDICTED: dihydropyrimidinase-related protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265131 True 1102 TUCP 0.44 3 223349 235752

Neighbor

gene id symbol gene type direction distance location
tmem214 tmem214,LOC104961504,LOC106608390 coding downstream 1120 213214 ~ 222229 (-)
trnay-gua_46 NA coding downstream 10351 212911 ~ 212998 (-)
trnaa-agc_30 NA coding downstream 11106 212171 ~ 212243 (-)
agbl5 agbl5 coding downstream 11462 198129 ~ 211887 (-)
LOC122333222 NA coding downstream 26415 189060 ~ 196934 (-)
crybg1b NA coding upstream 37871 273623 ~ 299817 (-)
mrap2b NA coding upstream 67824 303576 ~ 309649 (-)
sim1b sim1,LOC106571165,LOC106528967,LOC103374615,LOC107716225,LOC102194905 coding upstream 82007 317759 ~ 329602 (-)
ptpro ptpro,LOC107662223,LOC107745277,LOC107669033,LOC107572592,LOC107569205,LOC107758139 coding upstream 162636 398388 ~ 430427 (-)
LOC122333205 syn3,LOC107662220,LOC107722345,LOC107758147,LOC107698006,LOC107575455,LOC107561234 coding upstream 219925 455677 ~ 505570 (-)
LOC122333180 NA non-coding downstream 176348 34201 ~ 47001 (-)
G178746 NA non-coding upstream 126215 361967 ~ 391304 (-)
LOC122333201 grik2,LOC107574533,LOC107758138,LOC108233439,LOC106535628,LOC107377647,LOC103044887,LOC108435120,LOC108279510,LOC103365520 non-coding upstream 146550 382302 ~ 389371 (-)
G178759 NA non-coding upstream 170763 406515 ~ 408166 (-)
G178742 NA non-coding upstream 242441 478193 ~ 480561 (-)
G178779 NA non-coding upstream 304307 540059 ~ 540286 (-)
sobpb sobpb,LOC107701362,LOC107570168,LOC107738580,LOC107569949,LOC107680816 other upstream 9326 245078 ~ 259665 (-)
G178734 NA other upstream 71460 307212 ~ 336614 (-)
G178757 etv6,LOC107758141,LOC107698007 other upstream 222301 458053 ~ 520366 (-)
LOC122333240 LOC107707964,LOC107658786,LOC107561235,LOC107707096,LOC107662207,LOC107568705 other upstream 645706 881458 ~ 890779 (-)
mtpn mtpn,LOC106576424 other upstream 676152 911904 ~ 924260 (-)

Expression


Co-expression Network