G178746


Basic Information

Item Value
gene id G178746
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 361967 ~ 391304 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265184
CAATAAGTGATTATGAGTGACTTCCTGTTAGCCACTTCCTGTTTGAATCCACACACGGCTCTGCTTGCGGCGTGCAAATGATACAGTGATATATAACTGCATAAATCTCgatatttttatagaattgcACGAAATTAGCAGAAActtgagtgaatgaatgaatgaatgtggtTTAAATCGCGCGTCACTCACCGGATCCGGATGTTGGATCTTCCCTCGGTTTCTGAATCAGACGCGAGCGGCTCGGTTCTGCTGCTCAGCAcagttctgtctgtctgtctgtctgagtgtgtgtgtgtgtgagagagagagtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgcgcaagtgagtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
TU265184 True 398 lncRNA 0.46 2 361967 391304

Neighbor

gene id symbol gene type direction distance location
sim1b sim1,LOC106571165,LOC106528967,LOC103374615,LOC107716225,LOC102194905 coding downstream 32365 317759 ~ 329602 (-)
mrap2b NA coding downstream 52318 303576 ~ 309649 (-)
crybg1b NA coding downstream 62150 273623 ~ 299817 (-)
mapre3b mapre3b,mapre3,LOC107729016,LOC107701363,LOC107570175,LOC101073432 coding downstream 131997 223370 ~ 229970 (-)
tmem214 tmem214,LOC104961504,LOC106608390 coding downstream 139738 213214 ~ 222229 (-)
ptpro ptpro,LOC107662223,LOC107745277,LOC107669033,LOC107572592,LOC107569205,LOC107758139 coding upstream 7084 398388 ~ 430427 (-)
LOC122333205 syn3,LOC107662220,LOC107722345,LOC107758147,LOC107698006,LOC107575455,LOC107561234 coding upstream 64373 455677 ~ 505570 (-)
zgc:165507 slc16a7,LOC107698009,LOC107662218,LOC107568725 coding upstream 163205 554509 ~ 569266 (-)
fbxo7 fbxo7,LOC107710073,LOC107707973,LOC107568699 coding upstream 226019 617323 ~ 622893 (-)
xpot xpot,LOC107662216,LOC107658760 coding upstream 240180 631484 ~ 645982 (-)
LOC122333180 NA non-coding downstream 314966 34201 ~ 47001 (-)
G178759 NA non-coding upstream 15211 406515 ~ 408166 (-)
G178742 NA non-coding upstream 86889 478193 ~ 480561 (-)
G178779 NA non-coding upstream 148755 540059 ~ 540286 (-)
G178780 NA non-coding upstream 154183 545487 ~ 545785 (-)
G178782 NA non-coding upstream 161796 553100 ~ 553524 (-)
G178734 NA other downstream 25353 307212 ~ 336614 (-)
sobpb sobpb,LOC107701362,LOC107570168,LOC107738580,LOC107569949,LOC107680816 other downstream 102302 245078 ~ 259665 (-)
dpysl5b dpysl5,dpysl5b other downstream 116958 230412 ~ 245009 (-)
G178709 dpysl5,dpysl5b other downstream 126215 223349 ~ 235752 (-)
G178757 etv6,LOC107758141,LOC107698007 other upstream 66749 458053 ~ 520366 (-)
LOC122333240 LOC107707964,LOC107658786,LOC107561235,LOC107707096,LOC107662207,LOC107568705 other upstream 490154 881458 ~ 890779 (-)
mtpn mtpn,LOC106576424 other upstream 520600 911904 ~ 924260 (-)
G178856 NA other upstream 737895 1129199 ~ 1139105 (-)
arid2 arid2,LOC107707985,LOC107658978,LOC107555896,LOC107707104,LOC107590507 other upstream 789384 1180688 ~ 1200891 (-)

Expression


Co-expression Network