G178779


Basic Information

Item Value
gene id G178779
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 540059 ~ 540286 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265235
TGGACGGTTCATAAGTAATATCTGATGAAACACATTAGAAGTAGTGGTTCATCTCTTCCAAGATAAACGTTTTCATTTACAtagtacatgtgtgtgtgtgtgtgtgcatgcttgtttatctttaaaacacatcctgtgtgtgtgtgttcgtatttacacacacacacacacacacacacaactacacacagaacacacatatattatgcatgtaaaaatgaactGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265235 True 228 lncRNA 0.36 1 540059 540286

Neighbor

gene id symbol gene type direction distance location
LOC122333205 syn3,LOC107662220,LOC107722345,LOC107758147,LOC107698006,LOC107575455,LOC107561234 coding downstream 34489 455677 ~ 505570 (-)
ptpro ptpro,LOC107662223,LOC107745277,LOC107669033,LOC107572592,LOC107569205,LOC107758139 coding downstream 109632 398388 ~ 430427 (-)
sim1b sim1,LOC106571165,LOC106528967,LOC103374615,LOC107716225,LOC102194905 coding downstream 210457 317759 ~ 329602 (-)
mrap2b NA coding downstream 230410 303576 ~ 309649 (-)
crybg1b NA coding downstream 240242 273623 ~ 299817 (-)
zgc:165507 slc16a7,LOC107698009,LOC107662218,LOC107568725 coding upstream 14223 554509 ~ 569266 (-)
fbxo7 fbxo7,LOC107710073,LOC107707973,LOC107568699 coding upstream 77037 617323 ~ 622893 (-)
xpot xpot,LOC107662216,LOC107658760 coding upstream 91198 631484 ~ 645982 (-)
pthlha LOC107658788,LOC107561237,LOC107710069,LOC107568710,LOC107662243,LOC107561228 coding upstream 110292 650578 ~ 660910 (-)
rpl18a rpl18a,LOC107658993 coding upstream 213069 753355 ~ 756226 (-)
G178742 NA non-coding downstream 59498 478193 ~ 480561 (-)
G178759 NA non-coding downstream 131893 406515 ~ 408166 (-)
G178746 NA non-coding downstream 148755 361967 ~ 391304 (-)
LOC122333201 grik2,LOC107574533,LOC107758138,LOC108233439,LOC106535628,LOC107377647,LOC103044887,LOC108435120,LOC108279510,LOC103365520 non-coding downstream 150688 382302 ~ 389371 (-)
LOC122333180 NA non-coding downstream 493058 34201 ~ 47001 (-)
G178780 NA non-coding upstream 5201 545487 ~ 545785 (-)
G178782 NA non-coding upstream 12814 553100 ~ 553524 (-)
G178828 NA non-coding upstream 291051 831337 ~ 833743 (-)
G178791 LOC107658990 non-coding upstream 316193 856479 ~ 946523 (-)
LOC122333259 NA non-coding upstream 419211 959497 ~ 1022163 (-)
G178757 etv6,LOC107758141,LOC107698007 other downstream 19693 458053 ~ 520366 (-)
G178734 NA other downstream 203445 307212 ~ 336614 (-)
sobpb sobpb,LOC107701362,LOC107570168,LOC107738580,LOC107569949,LOC107680816 other downstream 280394 245078 ~ 259665 (-)
dpysl5b dpysl5,dpysl5b other downstream 295050 230412 ~ 245009 (-)
G178709 dpysl5,dpysl5b other downstream 304307 223349 ~ 235752 (-)
LOC122333240 LOC107707964,LOC107658786,LOC107561235,LOC107707096,LOC107662207,LOC107568705 other upstream 341172 881458 ~ 890779 (-)
mtpn mtpn,LOC106576424 other upstream 371618 911904 ~ 924260 (-)
G178856 NA other upstream 588913 1129199 ~ 1139105 (-)
arid2 arid2,LOC107707985,LOC107658978,LOC107555896,LOC107707104,LOC107590507 other upstream 640402 1180688 ~ 1200891 (-)

Expression


Co-expression Network