G22574


Basic Information

Item Value
gene id G22574
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 817798 ~ 819540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25481
TATCACAGTTTGCAAAAAAAAAAAAAGTCAACAACCACACAACTGTTTTTAACATTAATGATAATAATAAAGCACCAAATCAGCATATTACAATGATTTCTGAAGGATCATGTGACACTGAATTCTAATTATGCTGAAAATTCAGCTTTGCCATCACAGGAATAAAATACATACTAAAATATATTAAATTAGAAATGTTATTTTAAATTGTAATAATATTTAACAATATTAGTGTTTGTGCTGTAATTTATGATCAAATAAATAAACAGATAAATGAGACATTGAAAACCAACAAAACTTTTGCTGAGCCTTGAAGATGCAAAACGCCCAATCATCGCTTATACATGCTTCACTGTTGGTATGAGGTTCTTCTCTCCAAACATGACATTTTAACTGTGTCCAAACAACTCCACCTTTTACCTGTCCTGTTACTCTTTAGCAGGGTCGAAAATAGTTGGTAACACTTTAGTTTAGGGTCCAATTCTTACTATTGAATATATCAATACAAGTATATGTTATGTCCTTGTTAACTCTTATACGCATGTGCTGAATGTACTGGGGAAATGTGTTCTGACAATGACAGTGATGATTAACCCTCTGGGGTCTGAGGATTTTTGGGGCCCTGGAGAAGTTTTGACATGCCCTGACATTTGTGCTTTTTTCAGTTGTTCATAAACATATTAATGGAAAAGGTGTCATTACACTGTATTCAGCACGAACTAGGCTACCATTATATGTGAGGAGCATGTATGTACATGTTTGTATTTTTGAAGGAATAACGTTTATGCATGGTTATTGAAAAAACAAAAAACTTAAGTCACTGAAATAAGGCCACAAATAAATACAAAATATGTGTTCACAAGACTTCTGGGTATTGGAAGTTGTAGACTAGTTTGCTTCAAAATTATGTAAAAATACCTGCCTACTCGTTCATATAAAATAATATATTGATTTAAATTTTGTAAGACACTTTTTGTCAAGAAACACAGTATGCATGGAGGCATGAATATTCATGAATAATGCTGTGATTCACACCTGAGAAGACAAAGACCCACATAATGACCTGCATAATGACTCGCATAATGAGCCCTTTCAGTCAGGTAGGCTATGTGAAAAAACCCTCTGTGATCAGGATCATATCAGCTATTAACGTTAATATAATGTCCACTCTTGACAAAAAAACATGATTTTTGTGATCTCATGCATGCACGTGTTATTGCACATCATGTGAAGAAAATTTTGTATAGGCCTATTATAGTTTAAAGTACAGTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25481 True 1274 lncRNA 0.36 2 817798 819540
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_00747650_00802075 NA coding upstream 15117 746547 ~ 802681 (+)
CI01000003_00731635_00742538 TFR1A coding upstream 75189 731200 ~ 742609 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding upstream 100419 664961 ~ 717379 (+)
CI01000003_00644619_00663181 NA coding upstream 154518 643655 ~ 663280 (+)
CI01000003_00596144_00607951 NA coding upstream 209760 596144 ~ 608038 (+)
CI01000003_00842413_00868623 TNK2 coding downstream 22873 842413 ~ 868663 (+)
CI01000003_00981851_01059504 TMTOPSA coding downstream 162311 981851 ~ 1059504 (+)
CI01000003_01126525_01129929 ADIPOQB coding downstream 306558 1126098 ~ 1130325 (+)
CI01000003_01140472_01168860 NA coding downstream 320802 1140342 ~ 1168900 (+)
CI01000003_01258265_01259530 NA coding downstream 438725 1258265 ~ 1259551 (+)
G22583 NA non-coding upstream 72860 744681 ~ 744938 (+)
G22585 NA non-coding upstream 235393 582068 ~ 582405 (+)
G22551 NA non-coding upstream 256186 560920 ~ 561612 (+)
G22544 NA non-coding upstream 295145 522149 ~ 522653 (+)
G22524 NA non-coding upstream 348896 468673 ~ 468902 (+)
G22601 NA non-coding downstream 60091 879631 ~ 879868 (+)
G22602 NA non-coding downstream 60413 879953 ~ 880262 (+)
G22603 NA non-coding downstream 61081 880621 ~ 880871 (+)
G22605 NA non-coding downstream 63065 882605 ~ 882932 (+)
G22615 NA non-coding downstream 76581 896121 ~ 896329 (+)
CI01000003_00390997_00406970 WDR33 other upstream 422584 390622 ~ 408312 (+)
G22420 NA other upstream 628359 179531 ~ 189439 (+)
G22578 NA other downstream 105263 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1043728 1862854 ~ 1868137 (+)
G23870 NA other downstream 1461120 2280660 ~ 2285641 (+)

Expression

G22574 Expression in PRJCA010000

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G22574 Expression in each Bioproject

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G22574 Expression in each Sample
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Co-expression Network