LOC122333262


Basic Information

Item Value
gene id LOC122333262
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 851301 ~ 859743 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043230814.1
TGACGCGCGGCGCGCTCCCGCGGGGTCTGATTTAAACGCGCGCGCTCGCGTCGCGTCACTGAGACGGACCTGAAGTGACTCGCAGATAATTCGTCAAACTCGCTCTCTTCGGCTGTTTCGCGATGTTTCAGTGCATCATGTGAAACTGGTCAGTCGGGTACGTGGAAATGCTCGGACCATTTCACACGACCCCTGACCTTTCCTGCCCGACCCTTTGAGACGCCGAGCCCTGGACGCTGTAAGCATGGACGTTCACCTGCACAAGAGCCGGGCGCTTCACTACGGCCTGAACGACCGGCCCGATGATGATCTGCAGTTCCTCAGTCTGGAGGAGCGGGAGTGTATTTTGTTCTTCGAGGAGACCATCGACTccctggaggaggaggagaagaagacgTTCGGCAGAGCTCCCCGCCACAGCCCTGTAGATCAGGACATCATTGACCTGGTGCACCCTTCACCCGACCCCAGCAAACACACGGACTCGCCGCCCGCCGGGCCAGATTTCCAAGAGCTGATTGTGCCCCCAGAGAGCCATTTTGAACTGAAGCCAAAACGAGAGCTGGATGTCCCAGACGGGCTTCACGACGGGTTCGGACATCAGCCGCCCGCAGGTTCGGTCCCTACCCCGGTTGTCATCGCCAGCAAGATCGCGGAGCACCAGGGCGCAGGCGGCGCGTCTGCATCGCAGCTGCTCCAGCGCAGACGCAGCCTCGAGTCCCCGACGACCCCCTCGGCCAAACACGGCCCTCCGACTCACACCAAACCCTCGCGTCTCCCCGACGGCCTCGGCGTGTTGAGGAGCAGCCGCGAGCACATCCCCCACTCGATCGCCACCGAGGCCGTCAGCGTCCAGGAGCGCCGGGCGCAGGCCCTCGCCAGCCTCACCGGCCCCGCGCACCCTCTGGACGGAGGAGAGCCGGCCTGCGTGCGCAACCTTCCCATGAGGAGCATCTCGTTCCGGGATCCCACGCCGGACAAGTCTAGGATGGAGGCGCTGTCGAAGCTCGGACTCGCTCAGAGGCGAGCGCAGTCCGTCGTGCAGACGTCTCCGAGGGAATCAGAAAACCTCAAGACCGGCGGCAACGTGCTCAACGTCAGCTATAAAGCTAGCGCTAGCGGCGACGTCCCCGTGATGGACACTACAGACCACTGCCAAACCAGATCCAGCCCTGCACCAACCGTGACCAGCGCTGAAGTCAATCACACTGATCTCAACAGCTACGGTTCCAGTAGGACGGAGGCACTTTCGAAGGTTGGACTCGCTCAGAGGCCAACGCAATCCGTCATGCATTCATCTCCGAGAGAGAGCACCGCGTTCAACATTAGCAGTCCAGCTAGCGCTAGCGCCGACGCCCCCGTGATGGACACTACAGACCACTGCCAAACCAGATCCAGCCCTGCACCGGCTTTAACGAGCGCCGAAGTCACACACAGTGATTTCAACAGCTACGGCGGGAAGAGCATCACTTTACCCAACAACATCCTTCAGGAGCGAGGGCCCTTCATCCTCAGCGCCCAGAACGGAGTCTGCGGAGATTCACAGCAACAGCTTTGGCGGCAGATCGCGAGTCATGACTCCGTCCCAGCCAAACCATCGGCCCCAAACCAGGACCGTCGCCCCGGTCAAAGAGGACCGCTCCAGCTCCTACAGGACTCCGAAAGAAGACGTAGCCCAGAGGAAAGCGTCGTACTCCGAAGCGCCCGTGAAGCAGCCGCCCGCGCTCCGAAGCCACCGCGCCACCAGACTCCCCTGAGTCCCACCAGCTCTCGCCCCGCCCCGCTGTCCCCGGAGCTACGCCGCAAGTCTCTGCCAAAGCCGTCCTTCCGCACTCAGGGAGTAACGGTGCAGTTTTCTGGGAGAGGAGCCACGGACGAGGCCAGGCGTGATGCTCTGCGCAAGCTAGGACTGCTGAGGAACACCTCGTAAGGGACCGTTATTAATCAGGAGAAGATGAAgaaataatctttccattgatgtctggTCTGTAAGGACAGGACGATATCGGGCTGAGATAAGTGTTGGAGTCTGAGGAGGCAAACAAAGGCAGATGTCCACTGAATTCCTTAGCAgtgcatattacattttgatatttatggtAGGGAAATTATTTAACTTCCTAATGATTTTAGGCATAAATGTGCTGCTCAGGACTGCGTTTACGCTCCAGGCTCACAAACGTTCACTAACTAATAACTAGACTCCAGTAAAACAGTTGATAAGCGATCGGTTAACCCGTGCTGGGCAGATTAGGTAGAAACTGCAGTTTGCTACCAAGTTACATCACATCTAACCTGTTTATATAGGATCATTTTATACCATGATGATCGAAGACCACAAATAGAAAAGTAATAGTATAAATCTCACTACATAAACACTATATGTTAGGGTTTGCAAAACTGAGGTTACAAGGGAAGtgtgaaaaatgtatcttaacAAGAATCACATTTACGTAAACcagtagttttaaaatgaaaacagcggTGACTGTTAGCAGACATCAGAGAAGGGCCAACATGCATGTGTTACTTACTGACTTGATTCCTAATTATCTATAATCTCAGGGAgacttatattaaaatgtcaaagagTTTCAgctgaccaaaaaaaattaaagcattaaaattagATATGCAATATTAGGAAAAAGCATCTTAAAAGCGAAATGATGTAAATAGAGGATTATTAGAGAGTTTACTGCCACTTTGTGAAGATTTATTCTATACTAAAGTAACTGTAGtctaattattagtattttagaACGGTAGAAAGTATTTGTAATAGTGATTTACCTAGCACTGATTTCAGTCagtcatatgtatatatgcacaaaCAACACGGGCATTACCTGAAGACTTCCTGAAGGTCAGAGCAGGGTTTAGGATCATCTGTTGGACAGCAGTTCAAATGCAACCTTTGAGAAAACCAACTAACACTCTTtcactgttttgttgttgtttgtttgtttgattaagACGTTCTAGATCAAGATAATCAAACCTTTAAAGACCCCAAGCAGTCCTTCTatctaaaacacacacctttATTGTAGATGTAGCTGCTTGAGGTGTTGAGCATGTGGCGTATGGAAACACTCAGCCCGGATGCAGCCATCTTTAATTGGCACATGACTCCAGAGCTGAGCCAATCACTCGAGTCTTAATTGTCATGTGACTGATGACTCCTCCCCCTGACTCTTCCTGTAATTCGGCTATGTTTAACAATACAAAAAGGGAATTTCAAAAGCCAGTtaactaataactaattaacttaattgcctcttttttttctttttttttttttgcctttttagttttttaatttttaatttttattatattcttagaatttttaaaactaaCCATTTTGACTTTTTGGTAAGTTTTGGGGgattttactgttaaatattagtcaaacaattaattgcatccaaagtaaaagtttttgtgtgtgtgagtgaatgcgTGAGCAtatttctgagtgtgtgtgtgttacttttttattatataaat

Function

GO: NA

KEGG:

id description
ko00062 Fatty acid elongation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043230814.1 True 3513 mRNA 0.50 6 851301 859743

Neighbor

gene id symbol gene type direction distance location
atp23 atp23,xrcc6bp1,LOC106576246,LOC106609469 coding upstream 3379 844355 ~ 847922 (+)
eps8a LOC107561250,LOC107568712,LOC107707945 coding upstream 15987 801545 ~ 835314 (+)
trnam-cau_120 NA coding upstream 51296 799934 ~ 800005 (+)
rtcb rtcb coding upstream 219730 623437 ~ 631571 (+)
echdc3 echdc3 coding upstream 234520 613342 ~ 616781 (+)
LOC122333207 NA coding downstream 71498 931241 ~ 932864 (+)
chrm2a chrm2a,LOC107561244,LOC107658987,LOC107707993,LOC107568718,LOC107662193,LOC108427087 coding downstream 107310 967053 ~ 1037182 (+)
LOC122333216 NA coding downstream 223651 1083394 ~ 1086227 (+)
LOC122333217 LOC107707997 coding downstream 227029 1086772 ~ 1089265 (+)
slc38a4 slc38a4,LOC107658982,LOC107662190,LOC107707107,LOC107555871,LOC107590506,LOC108411501 coding downstream 254989 1114732 ~ 1139102 (+)
G178619 NA non-coding upstream 7326 842836 ~ 843975 (+)
G178617 NA non-coding upstream 51889 798542 ~ 799412 (+)
G178589 LOC106593275 non-coding upstream 67825 687438 ~ 783476 (+)
G178592 LOC107707972,LOC107561230,LOC107658995,LOC107710075,LOC107662214,LOC107568726 non-coding upstream 81604 763558 ~ 769697 (+)
G178577 NA non-coding upstream 213175 637678 ~ 638126 (+)
G178627 NA non-coding downstream 7711 867454 ~ 868576 (+)
G178633 NA non-coding downstream 59046 918789 ~ 923825 (+)
G178639 NA non-coding downstream 86364 946107 ~ 948907 (+)
G178590 NA non-coding downstream 141815 1001558 ~ 1070895 (+)
G178664 NA non-coding downstream 282551 1142294 ~ 1142530 (+)
G178593 NA other upstream 12748 836350 ~ 838553 (+)
crebl2 crebl2,LOC107658994,LOC107707978 other upstream 72936 775376 ~ 778365 (+)
LOC122333210 fam19a2,LOC107698008,LOC107662242,LOC107728758,LOC106576259 other upstream 312423 524311 ~ 538878 (+)
G178541 NA other upstream 394947 451126 ~ 456354 (+)
G178503 NA other upstream 584573 264517 ~ 266728 (+)

Expression


Co-expression Network