trnay-gua_46


Basic Information

Item Value
gene id trnay-gua_46
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 212911 ~ 212998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2687
CCTTcgatagctcagttggtagagcggaGGACTGTAGATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2687 True 73 tRNA 0.55 2 212911 212998

Neighbor

gene id symbol gene type direction distance location
trnaa-agc_30 NA coding downstream 668 212171 ~ 212243 (-)
agbl5 agbl5 coding downstream 1024 198129 ~ 211887 (-)
LOC122333222 NA coding downstream 15977 189060 ~ 196934 (-)
msgn1 msgn1,LOC107569960 coding downstream 23888 187575 ~ 189023 (-)
si:ch211-51e12.7 NA coding downstream 26086 180685 ~ 186825 (-)
tmem214 tmem214,LOC104961504,LOC106608390 coding upstream 216 213214 ~ 222229 (-)
mapre3b mapre3b,mapre3,LOC107729016,LOC107701363,LOC107570175,LOC101073432 coding upstream 10372 223370 ~ 229970 (-)
crybg1b NA coding upstream 60625 273623 ~ 299817 (-)
mrap2b NA coding upstream 90578 303576 ~ 309649 (-)
sim1b sim1,LOC106571165,LOC106528967,LOC103374615,LOC107716225,LOC102194905 coding upstream 104761 317759 ~ 329602 (-)
LOC122333180 NA non-coding downstream 165910 34201 ~ 47001 (-)
G178746 NA non-coding upstream 148969 361967 ~ 391304 (-)
LOC122333201 grik2,LOC107574533,LOC107758138,LOC108233439,LOC106535628,LOC107377647,LOC103044887,LOC108435120,LOC108279510,LOC103365520 non-coding upstream 169304 382302 ~ 389371 (-)
G178759 NA non-coding upstream 193517 406515 ~ 408166 (-)
G178742 NA non-coding upstream 265195 478193 ~ 480561 (-)
G178779 NA non-coding upstream 327061 540059 ~ 540286 (-)
G178709 dpysl5,dpysl5b other upstream 10351 223349 ~ 235752 (-)
dpysl5b dpysl5,dpysl5b other upstream 17414 230412 ~ 245009 (-)
sobpb sobpb,LOC107701362,LOC107570168,LOC107738580,LOC107569949,LOC107680816 other upstream 32080 245078 ~ 259665 (-)
G178734 NA other upstream 94214 307212 ~ 336614 (-)
G178757 etv6,LOC107758141,LOC107698007 other upstream 245055 458053 ~ 520366 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnay-gua-287 NA coding NC_048585.1 CM023239.2 59859016 ~ 59859102 (+)
eurasian perch (Perca fluviatilis) trnay-gua_62 NA coding NC_053134.1 CM020931.1 23887337 ~ 23887424 (+)
striped catfish (Pangasianodon hypophthalmus) trnay-gua_11 NA misc NC_047623.1 CM018569.1 3201632 ~ 3201719 (+)
tiger barb (Puntius tetrazona) trnac-gca_56 NA coding NC_056709.1 CM032078.1 1124291 ~ 1124362 (-)
mexican tetra (Astyanax mexicanus) trnay-gua_11 NA misc NC_035921.1 CM008324.1 13316075 ~ 13316162 (+)