G23180


Basic Information

Item Value
gene id G23180
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1544521 ~ 1601182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26158
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTACAAATTAGTATCTTTATTTCAAAAATTCTTCAAATCAAGGACTGTTGCCCACAAAGCACAAACTTTAGACCGATGTTACATTAATGAGATGTACATAATCTATCTAAAAAACATGGATACGTTGTCATAATGTTGCCAACCCCTAACAGTGAAAATTTTTCCTTGAAATATCACATCATGCCCACAGTCCACATCAATCCCAACCCATCTTCATAAAAAATAACCATTAGTACGCCAATGCATTTTTGCCTCAGGCATACTTTGATGCAATAGTGTTCCCCCAACCACTTTTATGAGGTACCAAACATATTTAGCAGCCTTTCTGAAGCTACATTGTGTTAGTAACTGAATTAAGCAGGCAAATCCAAAGGAACATGATTTTAAACCAAACTGCAACTCCCAAGTGTACACTTATGTTTTGGTTAATTAAACCTCAGGTTAGCCTAGTGGCTAAAGTCACGACATTAATGCTAGCACTCCATTTCTTAGCATGTCAATGCTAATTAATGCAGAACAGCACAACTTTGTAAGTAAACATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAGTAATGTTTATCATTTTCCACTGCCACTCATTTTCCCAACTTTGTTAATTAGCTAAGACTAAAGTTATTTTACTGCCTGAAACCCACACAGTTCTGGCAGCGCTAGCAGTAAACTGCTAGCCATTTGTGTAACATGTCATTCTTGTCATAGCATCACAATACATTAAGTGATTGTCCATTGTGGCTCACTGTTGACAGTTCTTTCATTATTTGTGAAATTAGCTAATTATATGAAATATGCAAACAGAAAAATGAAAAGGAATACACACAAATAAATAAAAATGATTAGTCACACATTTCTTACCCACATTCATACAAACAAACAAACAAAAAATGTTGCCCTCTTGTTACTTTTGTCTCCTTTGTTGTCTTGGTTGGTTTACCACAATGACTGCAGCGTTACATGTGGTTAGAGCTTGCTTGGACGTTTACACACATTCAAGGAAATGACTGTTGTCTCTTCCACATACACTCTCCTTACTGTATCATTTCAATACTGAAAGGATCTTCCAAGTCTGTCAGAGTTTAGGTTTATTTGGTGGATGTTGAAAGGAAAAGCTGTGTAAAAGAGGCCTTCTGTACACCCAGAGGAGAGTCCTGAGTTAAGTGTGTTCCTATACATGTAACATGAAAATGTAAAGCTGGCGTTGTCCACTGCCATTCAGCGTCACAGAGCCGTTAGTAGATGAGTCGCTCTCTCTCTGTACCCACAAACCTGTTGTGAGCAGCCATGACTTTTGCTTTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26158 True 1354 lncRNA 0.35 2 1544521 1601182
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000003_01489211_01493471 GATA6 coding upstream 50496 1487837 ~ 1494025 (+)
CI01000003_01430247_01451033 NA coding upstream 92895 1430247 ~ 1451626 (+)
CI01000003_01382733_01410162 MIB1 coding upstream 134331 1382448 ~ 1410190 (+)
CI01000003_01356590_01360272 NA coding upstream 184173 1356477 ~ 1360348 (+)
CI01000003_01329453_01342093 NA coding upstream 201849 1329453 ~ 1342672 (+)
CI01000003_01728663_01761628 MMP16B, MMP16 coding downstream 127270 1728452 ~ 1762479 (+)
CI01000003_01797491_01803265 PTER coding downstream 195439 1796621 ~ 1806332 (+)
CI01000003_01863421_01867859 NA coding downstream 261672 1862854 ~ 1868137 (+)
CI01000003_01889537_01891879 NA coding downstream 288316 1889498 ~ 1892071 (+)
CI01000003_01893593_01901539 SCHIP1 coding downstream 292411 1893593 ~ 1901769 (+)
G23251 NA non-coding upstream 2085 1542129 ~ 1542436 (+)
G23246 NA non-coding upstream 36051 1508250 ~ 1508470 (+)
G23244 NA non-coding upstream 39540 1504549 ~ 1504981 (+)
G23242 NA non-coding upstream 58123 1486182 ~ 1486398 (+)
G23223 NA non-coding upstream 166166 1378059 ~ 1378355 (+)
G23195 NA non-coding downstream 13431 1614613 ~ 1684836 (+)
G23186 NA non-coding downstream 15784 1616966 ~ 1629499 (+)
G23295 NA non-coding downstream 119518 1720700 ~ 1720940 (+)
G23304 NA non-coding downstream 126798 1727980 ~ 1728184 (+)
G23301 NA non-coding downstream 189188 1790370 ~ 1790726 (+)
G22578 NA other upstream 619273 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1149307 390622 ~ 408312 (+)
G22420 NA other upstream 1355082 179531 ~ 189439 (+)
G23870 NA other downstream 679478 2280660 ~ 2285641 (+)

Expression

G23180 Expression in PRJCA010000

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G23180 Expression in each Bioproject

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G23180 Expression in each Sample
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Co-expression Network