Gene
RNA
| Item | Value |
|---|---|
| gene id | G23379 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000003 |
| NCBI id | null |
| chromosome length | 2831192 |
| location | 1953337 ~ 1953707 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: protocadherin Fat 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU26378 | True | 371 | lncRNA | 0.43 | 1 | 1953337 | 1953707 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000003_01921110_01928830 | TXNDC12 | coding | upstream | 23716 | 1920837 ~ 1929621 (+) |
| CI01000003_01907347_01909263 | NA | coding | upstream | 43737 | 1907122 ~ 1909600 (+) |
| CI01000003_01893593_01901539 | SCHIP1 | coding | upstream | 51568 | 1893593 ~ 1901769 (+) |
| CI01000003_01889537_01891879 | NA | coding | upstream | 61266 | 1889498 ~ 1892071 (+) |
| CI01000003_01863421_01867859 | NA | coding | upstream | 85409 | 1862854 ~ 1868137 (+) |
| CI01000003_01956459_01966449 | SLC25A24L | coding | downstream | 2694 | 1956401 ~ 1966455 (+) |
| CI01000003_01969544_01973134 | COPE | coding | downstream | 15623 | 1969330 ~ 1973134 (+) |
| CI01000003_01982406_01992219 | NA | coding | downstream | 28629 | 1982336 ~ 1992844 (+) |
| CI01000003_02070747_02072861 | NA | coding | downstream | 117040 | 2070747 ~ 2073389 (+) |
| CI01000003_02101903_02151773 | NA | coding | downstream | 147108 | 2100815 ~ 2151976 (+) |
| G23323 | NA | non-coding | upstream | 94123 | 1858488 ~ 1859214 (+) |
| G23322 | NA | non-coding | upstream | 95836 | 1855877 ~ 1857501 (+) |
| G23326 | NA | non-coding | upstream | 98169 | 1854305 ~ 1855168 (+) |
| G23346 | NA | non-coding | upstream | 101659 | 1851281 ~ 1851678 (+) |
| G23318 | NA | non-coding | upstream | 104268 | 1839845 ~ 1849069 (+) |
| G23383 | NA | non-coding | downstream | 25322 | 1979029 ~ 1979593 (+) |
| G23356 | NA | non-coding | downstream | 75825 | 2029532 ~ 2047851 (+) |
| G23770 | NA | non-coding | downstream | 185581 | 2139288 ~ 2139544 (+) |
| G23771 | NA | non-coding | downstream | 185838 | 2139545 ~ 2139868 (+) |
| G23787 | NA | non-coding | downstream | 246987 | 2200694 ~ 2200936 (+) |
| G22578 | NA | other | upstream | 1028089 | 924803 ~ 925248 (+) |
| CI01000003_00390997_00406970 | WDR33 | other | upstream | 1558123 | 390622 ~ 408312 (+) |
| G22420 | NA | other | upstream | 1763898 | 179531 ~ 189439 (+) |
| G23870 | NA | other | downstream | 326953 | 2280660 ~ 2285641 (+) |
