XLOC_000691


Basic Information

Item Value
gene id XLOC_000691
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 53490099 ~ 53491305 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003169
AATGACTCAAGATGATGTCTGCGTTATAATTACCATTTATAGCTTGTAGCATACAGGAACAGTCTTATCTAATGTATCTTTGACTTGACTTTCAGAGCGATGACCTTTGCTCAAAAGCAACAGCGCTGATAAGACAGATTAAGATATTATAGTGGATCTCTGCACTTCCTTGAACACTAAATCAGTCGGTGGAGATGATAATCATTAACTCAAATTAAAGAGACAGTTGaccattatttactcacactttactggctccaaaccagtttgagttgaTTAATTTTGCTgttcaatacaaaagaagatactttgaagaatgtttgagtGTTCTTAAATGTGCTGCCGAATCAAGATGGGATTTACTCATTATCACATATAAAGCTTTGCTGGGATCAAAACTCATGACAAAGACTTTGTACAGGTTCATTCAAGCACATCATCTACAGAGCTGCTGTGTGTGATGTGTCAAGCATTGATAGCAGACACACGCCAAAATAACACACAACCTGAAATACTGTGATCATTTCttgaaaaataatgatttaaaaaactaAACCGATATCAAAGACTGAGATTTCACCATGATTTTTTACTTGAATAACGTAcagcatcaaacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacaaacacacacaaacacacacaaacacacacaaacacacacacacacacacacacacacacacacacacgcgcatgtGCTTATacacaaactctctcacacacacaggtaaacatacaaacaaacccaaacacacttctacacgcacacacacacacacaggcacaccatcacacac

Function

GO:

id name namespace
GO:0015349 thyroid hormone transmembrane transporter activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003169 True 884 lncRNA 0.39 2 53490099 53491305

Neighbor

gene id symbol gene type direction distance location
XLOC_000690 ucp1 coding upstream 101185 53374454 ~ 53388914 (+)
XLOC_000689 AL935166.1 coding upstream 122065 53364510 ~ 53368034 (+)
XLOC_000688 tbc1d9 coding upstream 128991 53321878 ~ 53361108 (+)
XLOC_000687 NA coding upstream 168761 53320931 ~ 53321338 (+)
XLOC_000686 NA coding upstream 169425 53320159 ~ 53320674 (+)
XLOC_000692 NA coding downstream 17200 53508505 ~ 53510623 (+)
XLOC_000693 si:ch211-213b8.4 coding downstream 23784 53515089 ~ 53535565 (+)
XLOC_000694 NA coding downstream 164926 53656231 ~ 53658289 (+)
XLOC_000695 NA coding downstream 197672 53688977 ~ 53695555 (+)
XLOC_000696 pus10 coding downstream 223429 53714734 ~ 53730536 (+)
XLOC_000684 NA non-coding upstream 211811 53266400 ~ 53278288 (+)
XLOC_000681 NA non-coding upstream 682256 52807632 ~ 52807843 (+)
XLOC_000697 NA non-coding downstream 269492 53760797 ~ 53770739 (+)
XLOC_000699 NA non-coding downstream 373223 53864528 ~ 53865837 (+)

Expression


Co-expression Network