G183268 (LOC107693569,LOC107673775,LOC107565605,LOC107661871,LOC107722887,LOC107563216,LOC107661873)


Basic Information

Item Value
gene id G183268
gene name LOC107693569,LOC107673775,LOC107565605,LOC107661871,LOC107722887,LOC107563216,LOC107661873
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 598728 ~ 605197 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU271791
AAAAGGCCAGCTGGAGGCATTCGAACGGAGCAACAAGAAACTCAGAGATGTGTCTATCTGATCATAAGACCAGGAAATGCACCAGATTCAGACTGTGCATGGATGATGGGCATTGGATCAAAGACTATCCAGATATCCTACAAGACGAAGCTGATTGAGGCGAAGAGAGCGGAGAACAGGGAAGAAAGGTCTAGGGCGAACAACGGACAGCTACAAGACAGGGAAGTGAACATTTTCtaaccacacacacgcactgatGTACATATTGCTCCCCGCTATTAAGAAAAGCttgcatgtatttgtgtgtttctgatAAGAGTAATGATACTTTTGATAACAGTTTAATGATCATTTTGAACTTTGCTGGGTCATCAAGATATTTCTCATGACTTGCCATGTCAACCGCCATTAACTGAAAACcaaataagtatatttaagaTATATGACCCCCCCTATATTTGCGAAATAAAAGGGAGACGAGGGCTGAAACATGCATTCTTTTACTTTAGTTGCAGAGAAGGAGTAAATATGCTGCCTGCACGTCTCAACAAGTATACGAATGGTAAATTAAAAGTGATGAATGGGCAAAAACGATGTGTGGAATagctaaaaacagaaatgagccattcaacacagaaaaaatgttgaatagCAATTTGCATTGTACGTGAAAAGTCATAGAAAAAGATCACCGTATAAGAAAGGCAGGTTGAAGGACAAGAAAAGGAaaactttgcatttaaaaaaaaaaagattcactgCAGCCAGTATGTGTGCAATTTCAGTCAGCTTGACATAGAAacagaaggttttttttaactctcGGGGTGTGTTCCTCACTTTCCTCATCTCTTTCAAAACCTAACAACAAAACATGGTGGCGGTTTTTGTGAAGAGCTGCTAATGCTATAGAGAGGGCTGAAACAAGAGTTGATTTAAAACGCagcaaaagtttaaaaacagtgAGTGCAAAAGTGAAATAGTGGTGGAAAGAGTTGTAAAACCCATTACAAACCATGTGAAATCCAAGATTGTTTGAAatcacaaacaattttgagAATAAAACCAGTATTTCAGTCACTATTACAAGAGGGAATAATTGTGTTGTGCAATAACCTGCCTGTTCACCCTGTTAAAGATCAGAGATAAGGGACAACTATCAGGATTCACAAGCAGTATTTAATGCACCCTCAGttcatttaatgcactttttatcgTACCGGTGGAAAGCTATCAAGGATGTGCTAAAACCTTTCTCAAAGACACAAATGTTGTCATTTAGGAATGTGTTCATACTGTAGAACATTTATTCTAATCATTCAGTGCTTGAGCAATCTTTGAGTGCCCTAACAACAGGGAAGGGGTTAAATCATCTGACAAATAATTATTGGACAAATGTTGGACAAATTGCCAAATGTTATGGTTAAGTGTTACACAACATTGAATCCTGCCGCTCTCTTTCAGATGGAGGGAAACATCGTAGTTGTCTGACAGTTCTTGAGCAAGTGTGCACACCACAACCTAACCTTTCAGATGAACCACTTGAAAAATTGCGAAAACGTCCTCTTCGCGGATGGCTCAGTTTTTAGCGAACAGGCCAAGTAAAGTCGGATACACTGTAACAACCGAATTTGAAAGTGTGGCTTCTGCCACGTTGCCATTGAATTATTCAGCCCAAGCAGTGGAGCTTGTGGCCTTAACAGACAAGTGTGTGTCAGTCTACACAGATTTGTGACATTTGGAGTGATGCTTGATTTTTGaagtgcaaaaacagatttcTAAATCTCATGGGTGCCTAATACTAAATTCTGTTTTAGTGGCAGcttaattagtattaattaattactactattaataacGAAGATTCTGTTTCTACAGGAATCATCAGATCAGATGCAACTGCAAAGGTCGCAGTCAAAAGAACGGAGTGTACTTTGTTATCGGACATGaacttttgacagttttttctTCATAGAGCATGCAGGCCTTTTCTCTAGAAGCAGAGACAAACCAGGGCTTACACAGGGCTTCGCAACTTTCACAGAAAATGTTTGCAAATGATGTGTCGTTTGTGACACATCAACACAATGTGGCAAAAGGCTTAAAGATGCCTCAAGTATCACAACCCAATCCAACAGACCAGTCCGAATATCTGATGACAGACTATCTGTGTACGTGACTTCAACCTAGTCATTTTGTGATAGTACGAGATCTGAGGAGAAAGAGCTGGAAGGTGAAAAGGTGTTTGGGACCACTGCAGGTGCTTCTGACTACTGAGAGAGAAACATGAAAACATGCCGGTCACTGTAGGAATATTCCTTTAGCATTTTAGGAAGAGGAGCGATTATcaatgaatgataaaaatggAGAGAATTGTCAcctatacattaaaaataaagactgaGCCTCTTATCCATTCGTGGAAAAGTACAGCTGTTAAGAGTTTGAAACCTTGAAGGTGAGACAAGATATAAAGAGGACTTCTTCGTTTCTGTATGACCTTCTTGCAAGAACAGAATGTACCGAATTTGTCTTTTACATGGTGAGAGTTGATTTAAAATGGtacaggtaaggttagggacaggtttggagGTAAGGGTATGTTTAGGGTGGGTTTAGCTGTAAGGGATGTGTCAAACAGTGTAATGTTACCGAAATTCtatacagatgtaattacatgtacTTTTAATGCCTTTAAGTACaaagtaaaaacatgcatgtacacaacAAGCGCATTATactaaataattgatttaaaggtaagtagttaaggccaccaaCTATAAAGTGGGACAGATCTGTCAATATACAGTCATTGGGAATTTGGAAACATGAGCTGTCAAAGTCAATAAAACTGCCGTTTTGGGGAGATTGCCGTTTCTTGTCATACCTCAGAATTGTCACATGTTAATGTAGAATATAACAGTTAATGTAGAATCactcataaaaatatatgctgaaGTATATGAATCAAATTGACTCACCTTCAGTATGTTGAGAGGAGATGTTTGAAAtcagcactaaaacacacagagagaaaactCACTATAAATGTGAAGATTGAgcttataattataaatacaatattaagtTATTGTGTAGAGGACTGTATATGTGTCTAGATAAACATTAACTGgtattttatagatttaattGTAGAAGAGATCTGTTTCAGGAACTTCAAGAAATGAGCAGAAGAATAAAGACGAACTCTTACTAACTGTACAAGTGAATATTACAATAACTTCAAAAACCAATAGAACTGATTCAACAGTGTTACATCACAAAACTGAACAAACACTGATCTACAACAGAGTGCTTTTCTCTTTCACAAACAACCTCCTCTCTCAAACTCATCCTTCACTTATATATCATGAACTAGAGCTGGATCTCAAACTCTGAGAGCAGCAAGAAAAGACACAAACCTAGGAACACTAAAACACTTGATCATctacataatataatttcagttacacaaaagtacattttagaaaaataatactcACGGAGCATAAGAGGAAGTTGACTGAGCTCCATACTGACTGAATGAAGTAAGACACTTAAAGACACAGACACAGTATTAAAAACTCAAGACTTCCTGAAAACTGCATCAGATCTTTAGTGTTACAGAAGATCTGGTAAAATAggttataaaatacaatatatgcCTACCGCTCATGTTTCAAGTCCGCTCAAGTAACATGCTTCAAAACCTCTAAAGatgaagaacaaaaataaaattaataatacaaataaatagaaacacatttacatgatgctgaaaacacattCTGTAATGAAAGCAGACGCACACTGAAGGTAAGCTGATTATTCACAAAATTTATTTGCACAGATGCAGATAACAGGTCAGCATCGTAAGCAAAGACAAAGTAAGGCAGCAGCTTCAGTAGTATTAACACGGTTCTTATCTTTCACAGGAACAGCGATGACGAAGGAGTCGAAGGTGATCcggggaacacacacacaccacaaccaCAGAAGATCACAGGACACAACGAGGAATACAGCAGacAAGCGGGTTCAACGAAGCAGGGGAGTTTATCAACAGATTCAATTCAACAGCATTCAAGAGGGAGAGAGTATTGCCGCCGGGAATCAAGGAACCAACCGCCGTGGACCTGGTAGATCGTGTCTCAGAGGATTTCAGGCTGGTTTGGAGGAGGGGGCGGTTATGGGTCTGTGGAAGGAGGAGTAGGTTTAGGCGATAAGTGACTGGATTGATCTGAAAATGTATGGTGAATGGACCTATGTAGAGGGGACTCGGCAGTCAGAGGCAGATATCTCTGGTGGAAAGCCATACCTTGTCTCCTGGAAGATAGGTGGGATGTGTTAACCTGGGATGGTTGGTGGTTTCCGTATGCCTCCGTGCTGCTCACTGTAAATGTCCATAAGTTAAATCTAGTATGTTCaatatgacacttttttttcttaacattgTATACCCCTAATTGTGATGGTAATGCAGAAAACAAtgtatgtaacatttttatttttttttttttacaatgataATTCCTGATGGATCAGATCAAGCTGTACACATTTTCTTGTTGAATATATCGTTTCACACAGAAGTCAAAAGAGTTGTGATGCTGTTCTTGATGACTTTAACAACTGTGAGATGTCAAAAACTTCTCTTCCAAAGCATGACTTTTACACATTTGTAAATCAGCACGACTGTCACTAGCAGATATAGAGAAACTGTCAGAACAGAAGTGAATGTGTGGTGGACAGAGATCTGAGATCCTGAATGAGACGCTGAAgaagagacacacaaacactttatcAAGCACCATATCTGAACGAGAACATAAGAAGAAATAAATCAGCTCAGTTTGACTCTCACCTGTGACTGAGATCCAGCTCTTGGGTGACTCTCCTCTCTCTGGGTGTTTGCAGGAGTAGAAACCCTCGTGTGACTTTGAGACAGTAGAGATGATCATCTCTGTAGTTTGACTCTGGATGAGTGATTCATCTTTATAGAAATCAGCTCTGAGGTTTGGTGGGGTTGAATGTTGATATAAACAGCGTAGAGTCAGATTATCTCCTTCAGTCACAGGATGAACAGGACTCTCCAGAATCACACCCTCTacagaaacagagaaaacatcAGCAGAAGAATAGGACGAATATAGTGAGAATATATCTACAatgaaatgacaacaaaaacaaaaca

Function

NR:

description
PREDICTED: low affinity immunoglobulin gamma Fc region receptor II-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271791 True 5197 lncRNA 0.38 3 598728 605197

Neighbor

gene id symbol gene type direction distance location
amigo3 LOC107719706,LOC107661914,LOC107592822,LOC107703752,LOC107726275,LOC107562412 coding upstream 70453 516883 ~ 528275 (+)
LOC122334037 NA coding upstream 484512 106885 ~ 114216 (+)
LOC122334017 LOC107577399 coding downstream 94048 699245 ~ 715085 (+)
trnag-ucc_28 NA coding downstream 153027 758224 ~ 758295 (+)
LOC122334053 lamp3,LOC107747931,LOC107566879,LOC107752186,LOC107736124,LOC107550665 coding downstream 184035 789232 ~ 792555 (+)
mccc1 mccc1 coding downstream 187966 793163 ~ 801337 (+)
LOC122334044 NA coding downstream 514510 1119707 ~ 1124593 (+)
G183264 NA non-coding upstream 4919 593386 ~ 593809 (+)
G183263 LOC107693569,LOC107661871,LOC107673775,LOC107565605,LOC107722887,LOC107563216,LOC107661873 non-coding upstream 6208 590365 ~ 592520 (+)
G183212 LOC107756932,LOC107592839,LOC107691887,LOC100331190,LOC107555009,LOC107701594,LOC107733072 non-coding upstream 402139 186016 ~ 196589 (+)
G183199 NA non-coding upstream 523326 70263 ~ 75402 (+)
G183189 NA non-coding upstream 543060 54831 ~ 55668 (+)
LOC122334030 NA non-coding downstream 8655 613852 ~ 616200 (+)
G183318 NA non-coding downstream 89623 694820 ~ 764932 (+)
LOC122334031 NA non-coding downstream 114116 719313 ~ 720138 (+)
G183329 NA non-coding downstream 147395 752592 ~ 753274 (+)
G183338 NA non-coding downstream 182413 787610 ~ 787820 (+)
nicn1 nicn1,LOC107691891,LOC107678153,LOC107708487,LOC107564394 other upstream 537969 46644 ~ 60759 (+)
G183328 NA other downstream 144663 749860 ~ 752052 (+)
G183316 LOC107566876,LOC107747932,LOC107655274 other downstream 178087 783284 ~ 786940 (+)
G183354 NA other downstream 240383 845580 ~ 846714 (+)
dnajc19 dnajc19,LOC107727073 other downstream 480607 1085804 ~ 1088890 (+)
LOC122334032 NA other downstream 522666 1127863 ~ 1145945 (+)

Expression


Co-expression Network