G183338


Basic Information

Item Value
gene id G183338
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 787610 ~ 787820 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU271900
CCCACTGTAGATGTCTTCGTACATTTAACCAATATTGGGAGTTACGTAATCAGATTAGTTTTTTCAACTAGTAAAATAgcacattacttttaaatttaagaaGTAAATGCAAGAAGTAGCATTACTTTCCATGAAAAAAAGTACATGACGTAAAAGCAAAAACTTGAGGCATTGATACACTAAAATTTACTTTGGCATGCGTATGCTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271900 True 211 lncRNA 0.31 1 787610 787820

Neighbor

gene id symbol gene type direction distance location
trnag-ucc_28 NA coding upstream 29315 758224 ~ 758295 (+)
LOC122334017 LOC107577399 coding upstream 72525 699245 ~ 715085 (+)
amigo3 LOC107719706,LOC107661914,LOC107592822,LOC107703752,LOC107726275,LOC107562412 coding upstream 259335 516883 ~ 528275 (+)
LOC122334037 NA coding upstream 673394 106885 ~ 114216 (+)
LOC122334053 lamp3,LOC107747931,LOC107566879,LOC107752186,LOC107736124,LOC107550665 coding downstream 1412 789232 ~ 792555 (+)
mccc1 mccc1 coding downstream 5343 793163 ~ 801337 (+)
LOC122334044 NA coding downstream 331887 1119707 ~ 1124593 (+)
LOC122334039 NA coding downstream 367455 1155275 ~ 1159822 (+)
psmd1 psmd1,LOC107566382,LOC107655280,LOC107698053 coding downstream 377509 1165329 ~ 1195429 (+)
G183318 NA non-coding upstream 22678 694820 ~ 764932 (+)
G183329 NA non-coding upstream 34336 752592 ~ 753274 (+)
LOC122334031 NA non-coding upstream 67472 719313 ~ 720138 (+)
LOC122334030 NA non-coding upstream 171410 613852 ~ 616200 (+)
G183268 LOC107693569,LOC107673775,LOC107565605,LOC107661871,LOC107722887,LOC107563216,LOC107661873 non-coding upstream 182413 598728 ~ 605197 (+)
G183342 NA non-coding downstream 16692 804512 ~ 898906 (+)
G183403 sox2,LOC107698049,LOC107550678,LOC107655276,LOC106584342 non-coding downstream 212236 1000056 ~ 1070132 (+)
G183404 NA non-coding downstream 234327 1022147 ~ 1023159 (+)
LOC122334033 NA non-coding downstream 345383 1133203 ~ 1135105 (+)
LOC122334055 NA non-coding downstream 358222 1146042 ~ 1147773 (+)
G183316 LOC107566876,LOC107747932,LOC107655274 other upstream 670 783284 ~ 786940 (+)
G183328 NA other upstream 35558 749860 ~ 752052 (+)
nicn1 nicn1,LOC107691891,LOC107678153,LOC107708487,LOC107564394 other upstream 726851 46644 ~ 60759 (+)
G183354 NA other downstream 57760 845580 ~ 846714 (+)
dnajc19 dnajc19,LOC107727073 other downstream 297984 1085804 ~ 1088890 (+)
LOC122334032 NA other downstream 340043 1127863 ~ 1145945 (+)
G183477 NA other downstream 466131 1253951 ~ 1258660 (+)

Expression


Co-expression Network