G183354


Basic Information

Item Value
gene id G183354
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 845580 ~ 846714 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU271920
gagccagcgacagacacagtgggcgtggcgtcaggcctcggagaggcttttattgacaaaatcaaaataatacaaaataataaagtgtccaggggaaagtgtccaaataaaagggggatctggtgtcctcgtcgtgccacggggaaagtgaaggttgaggccgtgttccaggggggaagggtccaggaagggtgcgcgatggacctcaccccgccgtccgtgaacacagagctcatcccactctgccgcccggagcaacgaagcgacggagacgccgcggaagaagccgccgcccctcgcgccccggaccagaaaaaggggagcgtgtgcgaccgccggactccgccccttacctggacccttcccccctggaacacggcctcaaccttcactttcccgtGTACagcgaggacaccagatccccctt

Function

NR:

description
protein FAM107B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271920 True 427 TUCP 0.61 2 845580 846714

Neighbor

gene id symbol gene type direction distance location
mccc1 mccc1 coding upstream 44243 793163 ~ 801337 (+)
LOC122334053 lamp3,LOC107747931,LOC107566879,LOC107752186,LOC107736124,LOC107550665 coding upstream 53025 789232 ~ 792555 (+)
trnag-ucc_28 NA coding upstream 87285 758224 ~ 758295 (+)
LOC122334017 LOC107577399 coding upstream 130495 699245 ~ 715085 (+)
amigo3 LOC107719706,LOC107661914,LOC107592822,LOC107703752,LOC107726275,LOC107562412 coding upstream 317305 516883 ~ 528275 (+)
LOC122334044 NA coding downstream 272993 1119707 ~ 1124593 (+)
LOC122334039 NA coding downstream 308561 1155275 ~ 1159822 (+)
psmd1 psmd1,LOC107566382,LOC107655280,LOC107698053 coding downstream 318615 1165329 ~ 1195429 (+)
LOC122334042 NA coding downstream 497837 1344551 ~ 1346837 (+)
trnat-ugu_55 NA coding downstream 525661 1372375 ~ 1372448 (+)
G183338 NA non-coding upstream 57760 787610 ~ 787820 (+)
G183318 NA non-coding upstream 80648 694820 ~ 764932 (+)
G183329 NA non-coding upstream 92306 752592 ~ 753274 (+)
LOC122334031 NA non-coding upstream 125442 719313 ~ 720138 (+)
LOC122334030 NA non-coding upstream 229380 613852 ~ 616200 (+)
G183403 sox2,LOC107698049,LOC107550678,LOC107655276,LOC106584342 non-coding downstream 153342 1000056 ~ 1070132 (+)
G183404 NA non-coding downstream 175433 1022147 ~ 1023159 (+)
LOC122334033 NA non-coding downstream 286489 1133203 ~ 1135105 (+)
LOC122334055 NA non-coding downstream 299328 1146042 ~ 1147773 (+)
G183466 NA non-coding downstream 317710 1164424 ~ 1164872 (+)
G183316 LOC107566876,LOC107747932,LOC107655274 other upstream 58640 783284 ~ 786940 (+)
G183328 NA other upstream 93528 749860 ~ 752052 (+)
nicn1 nicn1,LOC107691891,LOC107678153,LOC107708487,LOC107564394 other upstream 784821 46644 ~ 60759 (+)
dnajc19 dnajc19,LOC107727073 other downstream 239090 1085804 ~ 1088890 (+)
LOC122334032 NA other downstream 281149 1127863 ~ 1145945 (+)
G183477 NA other downstream 407237 1253951 ~ 1258660 (+)

Expression


Co-expression Network